Gene : Medtr1g087380 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12702//PTHR12702:SF4 - SEC15 Description:  exocyst complex component sec15B
Genomic Order:  4818 Name:  ? Medtr1g087380
Secondary Identifier:  ? PAC:31097682
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087380 0.5kb upstream 0.5kb upstream 2943 true chr1: 39163611-39166553 Medicago truncatula
Medtr1g087380 0.5kb upstream 0.5kb upstream 500 false chr1: 39166054-39166553 Medicago truncatula
Medtr1g087380 0.5kb downstream 0.5kb downstream 2943 true chr1: 39163111-39166053 Medicago truncatula
Medtr1g087380 0.5kb downstream 0.5kb downstream 500 false chr1: 39163111-39163610 Medicago truncatula
Medtr1g087380 1.0kb upstream 1.0kb upstream 3443 true chr1: 39163611-39167053 Medicago truncatula
Medtr1g087380 1.0kb upstream 1.0kb upstream 1000 false chr1: 39166054-39167053 Medicago truncatula
Medtr1g087380 1.0kb downstream 1.0kb downstream 3443 true chr1: 39162611-39166053 Medicago truncatula
Medtr1g087380 1.0kb downstream 1.0kb downstream 1000 false chr1: 39162611-39163610 Medicago truncatula
Medtr1g087380 2.0kb upstream 2.0kb upstream 4443 true chr1: 39163611-39168053 Medicago truncatula
Medtr1g087380 2.0kb upstream 2.0kb upstream 2000 false chr1: 39166054-39168053 Medicago truncatula
Medtr1g087380 2.0kb downstream 2.0kb downstream 4443 true chr1: 39161611-39166053 Medicago truncatula
Medtr1g087380 2.0kb downstream 2.0kb downstream 2000 false chr1: 39161611-39163610 Medicago truncatula
Medtr1g087380 5.0kb upstream 5.0kb upstream 7443 true chr1: 39163611-39171053 Medicago truncatula
Medtr1g087380 5.0kb upstream 5.0kb upstream 5000 false chr1: 39166054-39171053 Medicago truncatula
Medtr1g087380 5.0kb downstream 5.0kb downstream 7443 true chr1: 39158611-39166053 Medicago truncatula
Medtr1g087380 5.0kb downstream 5.0kb downstream 5000 false chr1: 39158611-39163610 Medicago truncatula
Medtr1g087380 10.0kb upstream 10.0kb upstream 12443 true chr1: 39163611-39176053 Medicago truncatula
Medtr1g087380 10.0kb upstream 10.0kb upstream 10000 false chr1: 39166054-39176053 Medicago truncatula
Medtr1g087380 10.0kb downstream 10.0kb downstream 12443 true chr1: 39153611-39166053 Medicago truncatula
Medtr1g087380 10.0kb downstream 10.0kb downstream 10000 false chr1: 39153611-39163610 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311364 5265 Fabidae View MSA
124063470 5270 Rosid View MSA
123747184 5271 Pentapetalae View MSA
122789290 5272 Eudicot View MSA
122044095 5273 Angiosperm View MSA
121349214 5274 Embryophyte View MSA
123424246 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low High
cufflinks 0.015     Low Low

0 Strain