Gene : Medtr1g087320 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  4813 Name:  ? Medtr1g087320
Secondary Identifier:  ? PAC:31100415
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087320 0.5kb upstream 0.5kb upstream 4606 true chr1: 39137051-39141656 Medicago truncatula
Medtr1g087320 0.5kb upstream 0.5kb upstream 500 false chr1: 39137051-39137550 Medicago truncatula
Medtr1g087320 0.5kb downstream 0.5kb downstream 4606 true chr1: 39137551-39142156 Medicago truncatula
Medtr1g087320 0.5kb downstream 0.5kb downstream 500 false chr1: 39141657-39142156 Medicago truncatula
Medtr1g087320 1.0kb upstream 1.0kb upstream 5106 true chr1: 39136551-39141656 Medicago truncatula
Medtr1g087320 1.0kb upstream 1.0kb upstream 1000 false chr1: 39136551-39137550 Medicago truncatula
Medtr1g087320 1.0kb downstream 1.0kb downstream 5106 true chr1: 39137551-39142656 Medicago truncatula
Medtr1g087320 1.0kb downstream 1.0kb downstream 1000 false chr1: 39141657-39142656 Medicago truncatula
Medtr1g087320 2.0kb upstream 2.0kb upstream 6106 true chr1: 39135551-39141656 Medicago truncatula
Medtr1g087320 2.0kb upstream 2.0kb upstream 2000 false chr1: 39135551-39137550 Medicago truncatula
Medtr1g087320 2.0kb downstream 2.0kb downstream 6106 true chr1: 39137551-39143656 Medicago truncatula
Medtr1g087320 2.0kb downstream 2.0kb downstream 2000 false chr1: 39141657-39143656 Medicago truncatula
Medtr1g087320 5.0kb upstream 5.0kb upstream 9106 true chr1: 39132551-39141656 Medicago truncatula
Medtr1g087320 5.0kb upstream 5.0kb upstream 5000 false chr1: 39132551-39137550 Medicago truncatula
Medtr1g087320 5.0kb downstream 5.0kb downstream 9106 true chr1: 39137551-39146656 Medicago truncatula
Medtr1g087320 5.0kb downstream 5.0kb downstream 5000 false chr1: 39141657-39146656 Medicago truncatula
Medtr1g087320 10.0kb upstream 10.0kb upstream 14106 true chr1: 39127551-39141656 Medicago truncatula
Medtr1g087320 10.0kb upstream 10.0kb upstream 10000 false chr1: 39127551-39137550 Medicago truncatula
Medtr1g087320 10.0kb downstream 10.0kb downstream 14106 true chr1: 39137551-39151656 Medicago truncatula
Medtr1g087320 10.0kb downstream 10.0kb downstream 10000 false chr1: 39141657-39151656 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301022 5265 Fabidae View MSA
124065364 5270 Rosid View MSA
123740028 5271 Pentapetalae View MSA
122787997 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.746     High  
cufflinks 16.136     High  
cufflinks 18.264     High  
cufflinks 80.752     High High
cufflinks 13.265     High Low
cufflinks 44.651     High  
cufflinks 63.671     High  
cufflinks 15.862     High Low
cufflinks 51.209     High  

0 Strain