Gene : Medtr1g077940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14571:SF9 - PHD FINGER PROTEIN 13 Description:  RING/FYVE/PHD zinc finger protein, putative
Genomic Order:  4240 Name:  ? Medtr1g077940
Secondary Identifier:  ? PAC:31096248
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g077940 0.5kb upstream 0.5kb upstream 8209 true chr1: 34836799-34845007 Medicago truncatula
Medtr1g077940 0.5kb upstream 0.5kb upstream 500 false chr1: 34844508-34845007 Medicago truncatula
Medtr1g077940 0.5kb downstream 0.5kb downstream 8209 true chr1: 34836299-34844507 Medicago truncatula
Medtr1g077940 0.5kb downstream 0.5kb downstream 500 false chr1: 34836299-34836798 Medicago truncatula
Medtr1g077940 1.0kb upstream 1.0kb upstream 8709 true chr1: 34836799-34845507 Medicago truncatula
Medtr1g077940 1.0kb upstream 1.0kb upstream 1000 false chr1: 34844508-34845507 Medicago truncatula
Medtr1g077940 1.0kb downstream 1.0kb downstream 8709 true chr1: 34835799-34844507 Medicago truncatula
Medtr1g077940 1.0kb downstream 1.0kb downstream 1000 false chr1: 34835799-34836798 Medicago truncatula
Medtr1g077940 2.0kb upstream 2.0kb upstream 9709 true chr1: 34836799-34846507 Medicago truncatula
Medtr1g077940 2.0kb upstream 2.0kb upstream 2000 false chr1: 34844508-34846507 Medicago truncatula
Medtr1g077940 2.0kb downstream 2.0kb downstream 9709 true chr1: 34834799-34844507 Medicago truncatula
Medtr1g077940 2.0kb downstream 2.0kb downstream 2000 false chr1: 34834799-34836798 Medicago truncatula
Medtr1g077940 5.0kb upstream 5.0kb upstream 12709 true chr1: 34836799-34849507 Medicago truncatula
Medtr1g077940 5.0kb upstream 5.0kb upstream 5000 false chr1: 34844508-34849507 Medicago truncatula
Medtr1g077940 5.0kb downstream 5.0kb downstream 12709 true chr1: 34831799-34844507 Medicago truncatula
Medtr1g077940 5.0kb downstream 5.0kb downstream 5000 false chr1: 34831799-34836798 Medicago truncatula
Medtr1g077940 10.0kb upstream 10.0kb upstream 17709 true chr1: 34836799-34854507 Medicago truncatula
Medtr1g077940 10.0kb upstream 10.0kb upstream 10000 false chr1: 34844508-34854507 Medicago truncatula
Medtr1g077940 10.0kb downstream 10.0kb downstream 17709 true chr1: 34826799-34844507 Medicago truncatula
Medtr1g077940 10.0kb downstream 10.0kb downstream 10000 false chr1: 34826799-34836798 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302365 5265 Fabidae View MSA
124061869 5270 Rosid View MSA
123737201 5271 Pentapetalae View MSA
122791412 5272 Eudicot View MSA
122046243 5273 Angiosperm View MSA
121350322 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.012     High  
cufflinks 9.497     High  
cufflinks 11.437     High  
cufflinks 2.189       Low
cufflinks 12.048     High  
cufflinks 2.831       Low
cufflinks 5.752        
cufflinks 10.187     High  
cufflinks 3.832        

0 Strain