Gene : Medtr1g088430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11878 - SODIUM/CALCIUM EXCHANGER Description:  magnesium/proton exchanger-like protein
Genomic Order:  4872 Name:  ? Medtr1g088430
Secondary Identifier:  ? PAC:31100613
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g088430 0.5kb upstream 0.5kb upstream 7090 true chr1: 39538249-39545338 Medicago truncatula
Medtr1g088430 0.5kb upstream 0.5kb upstream 500 false chr1: 39544839-39545338 Medicago truncatula
Medtr1g088430 0.5kb downstream 0.5kb downstream 7090 true chr1: 39537749-39544838 Medicago truncatula
Medtr1g088430 0.5kb downstream 0.5kb downstream 500 false chr1: 39537749-39538248 Medicago truncatula
Medtr1g088430 1.0kb upstream 1.0kb upstream 7590 true chr1: 39538249-39545838 Medicago truncatula
Medtr1g088430 1.0kb upstream 1.0kb upstream 1000 false chr1: 39544839-39545838 Medicago truncatula
Medtr1g088430 1.0kb downstream 1.0kb downstream 7590 true chr1: 39537249-39544838 Medicago truncatula
Medtr1g088430 1.0kb downstream 1.0kb downstream 1000 false chr1: 39537249-39538248 Medicago truncatula
Medtr1g088430 2.0kb upstream 2.0kb upstream 8590 true chr1: 39538249-39546838 Medicago truncatula
Medtr1g088430 2.0kb upstream 2.0kb upstream 2000 false chr1: 39544839-39546838 Medicago truncatula
Medtr1g088430 2.0kb downstream 2.0kb downstream 8590 true chr1: 39536249-39544838 Medicago truncatula
Medtr1g088430 2.0kb downstream 2.0kb downstream 2000 false chr1: 39536249-39538248 Medicago truncatula
Medtr1g088430 5.0kb upstream 5.0kb upstream 11590 true chr1: 39538249-39549838 Medicago truncatula
Medtr1g088430 5.0kb upstream 5.0kb upstream 5000 false chr1: 39544839-39549838 Medicago truncatula
Medtr1g088430 5.0kb downstream 5.0kb downstream 11590 true chr1: 39533249-39544838 Medicago truncatula
Medtr1g088430 5.0kb downstream 5.0kb downstream 5000 false chr1: 39533249-39538248 Medicago truncatula
Medtr1g088430 10.0kb upstream 10.0kb upstream 16590 true chr1: 39538249-39554838 Medicago truncatula
Medtr1g088430 10.0kb upstream 10.0kb upstream 10000 false chr1: 39544839-39554838 Medicago truncatula
Medtr1g088430 10.0kb downstream 10.0kb downstream 16590 true chr1: 39528249-39544838 Medicago truncatula
Medtr1g088430 10.0kb downstream 10.0kb downstream 10000 false chr1: 39528249-39538248 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026222 5273 Angiosperm View MSA
122302932 5265 Fabidae View MSA
124062235 5270 Rosid View MSA
123741158 5271 Pentapetalae View MSA
122792676 5272 Eudicot View MSA
121347754 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306        
cufflinks 0.402        
cufflinks 0.337        
cufflinks 0.051     Low Low
cufflinks 0.902       High
cufflinks 0.13     Low  
cufflinks 0.207        
cufflinks 0.285        
cufflinks 0.064     Low Low

0 Strain