Gene : Medtr1g088130 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Description:  pollen Ole e I family allergens
Genomic Order:  4852 Name:  ? Medtr1g088130
Secondary Identifier:  ? PAC:31095067
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g088130 0.5kb upstream 0.5kb upstream 1779 true chr1: 39382081-39383859 Medicago truncatula
Medtr1g088130 0.5kb upstream 0.5kb upstream 500 false chr1: 39382081-39382580 Medicago truncatula
Medtr1g088130 0.5kb downstream 0.5kb downstream 1779 true chr1: 39382581-39384359 Medicago truncatula
Medtr1g088130 0.5kb downstream 0.5kb downstream 500 false chr1: 39383860-39384359 Medicago truncatula
Medtr1g088130 1.0kb upstream 1.0kb upstream 2279 true chr1: 39381581-39383859 Medicago truncatula
Medtr1g088130 1.0kb upstream 1.0kb upstream 1000 false chr1: 39381581-39382580 Medicago truncatula
Medtr1g088130 1.0kb downstream 1.0kb downstream 2279 true chr1: 39382581-39384859 Medicago truncatula
Medtr1g088130 1.0kb downstream 1.0kb downstream 1000 false chr1: 39383860-39384859 Medicago truncatula
Medtr1g088130 2.0kb upstream 2.0kb upstream 3279 true chr1: 39380581-39383859 Medicago truncatula
Medtr1g088130 2.0kb upstream 2.0kb upstream 2000 false chr1: 39380581-39382580 Medicago truncatula
Medtr1g088130 2.0kb downstream 2.0kb downstream 3279 true chr1: 39382581-39385859 Medicago truncatula
Medtr1g088130 2.0kb downstream 2.0kb downstream 2000 false chr1: 39383860-39385859 Medicago truncatula
Medtr1g088130 5.0kb upstream 5.0kb upstream 6279 true chr1: 39377581-39383859 Medicago truncatula
Medtr1g088130 5.0kb upstream 5.0kb upstream 5000 false chr1: 39377581-39382580 Medicago truncatula
Medtr1g088130 5.0kb downstream 5.0kb downstream 6279 true chr1: 39382581-39388859 Medicago truncatula
Medtr1g088130 5.0kb downstream 5.0kb downstream 5000 false chr1: 39383860-39388859 Medicago truncatula
Medtr1g088130 10.0kb upstream 10.0kb upstream 11279 true chr1: 39372581-39383859 Medicago truncatula
Medtr1g088130 10.0kb upstream 10.0kb upstream 10000 false chr1: 39372581-39382580 Medicago truncatula
Medtr1g088130 10.0kb downstream 10.0kb downstream 11279 true chr1: 39382581-39393859 Medicago truncatula
Medtr1g088130 10.0kb downstream 10.0kb downstream 10000 false chr1: 39383860-39393859 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288422 5265 Fabidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low Low
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.151     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.062        
cufflinks 8.265        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.857        

0 Strain