Gene : Medtr1g087140 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24423:SF514 - HISTIDINE KINASE CKI1 Description:  histidine kinase 1
Genomic Order:  4802 Name:  ? Medtr1g087140
Secondary Identifier:  ? PAC:31098811
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087140 0.5kb upstream 0.5kb upstream 6610 true chr1: 39028256-39034865 Medicago truncatula
Medtr1g087140 0.5kb upstream 0.5kb upstream 500 false chr1: 39034366-39034865 Medicago truncatula
Medtr1g087140 0.5kb downstream 0.5kb downstream 6610 true chr1: 39027756-39034365 Medicago truncatula
Medtr1g087140 0.5kb downstream 0.5kb downstream 500 false chr1: 39027756-39028255 Medicago truncatula
Medtr1g087140 1.0kb upstream 1.0kb upstream 7110 true chr1: 39028256-39035365 Medicago truncatula
Medtr1g087140 1.0kb upstream 1.0kb upstream 1000 false chr1: 39034366-39035365 Medicago truncatula
Medtr1g087140 1.0kb downstream 1.0kb downstream 7110 true chr1: 39027256-39034365 Medicago truncatula
Medtr1g087140 1.0kb downstream 1.0kb downstream 1000 false chr1: 39027256-39028255 Medicago truncatula
Medtr1g087140 2.0kb upstream 2.0kb upstream 8110 true chr1: 39028256-39036365 Medicago truncatula
Medtr1g087140 2.0kb upstream 2.0kb upstream 2000 false chr1: 39034366-39036365 Medicago truncatula
Medtr1g087140 2.0kb downstream 2.0kb downstream 8110 true chr1: 39026256-39034365 Medicago truncatula
Medtr1g087140 2.0kb downstream 2.0kb downstream 2000 false chr1: 39026256-39028255 Medicago truncatula
Medtr1g087140 5.0kb upstream 5.0kb upstream 11110 true chr1: 39028256-39039365 Medicago truncatula
Medtr1g087140 5.0kb upstream 5.0kb upstream 5000 false chr1: 39034366-39039365 Medicago truncatula
Medtr1g087140 5.0kb downstream 5.0kb downstream 11110 true chr1: 39023256-39034365 Medicago truncatula
Medtr1g087140 5.0kb downstream 5.0kb downstream 5000 false chr1: 39023256-39028255 Medicago truncatula
Medtr1g087140 10.0kb upstream 10.0kb upstream 16110 true chr1: 39028256-39044365 Medicago truncatula
Medtr1g087140 10.0kb upstream 10.0kb upstream 10000 false chr1: 39034366-39044365 Medicago truncatula
Medtr1g087140 10.0kb downstream 10.0kb downstream 16110 true chr1: 39018256-39034365 Medicago truncatula
Medtr1g087140 10.0kb downstream 10.0kb downstream 10000 false chr1: 39018256-39028255 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314540 5265 Fabidae View MSA
124066591 5270 Rosid View MSA
123753763 5271 Pentapetalae View MSA
122789749 5272 Eudicot View MSA
122048751 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121348111 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain