Gene : Medtr1g069420 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Description:  Sad1/UNC-like carboxy-terminal protein
Genomic Order:  3619 Name:  ? Medtr1g069420
Secondary Identifier:  ? PAC:31100475
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g069420 0.5kb upstream 0.5kb upstream 7520 true chr1: 30025776-30033295 Medicago truncatula
Medtr1g069420 0.5kb upstream 0.5kb upstream 500 false chr1: 30032796-30033295 Medicago truncatula
Medtr1g069420 0.5kb downstream 0.5kb downstream 7520 true chr1: 30025276-30032795 Medicago truncatula
Medtr1g069420 0.5kb downstream 0.5kb downstream 500 false chr1: 30025276-30025775 Medicago truncatula
Medtr1g069420 1.0kb upstream 1.0kb upstream 8020 true chr1: 30025776-30033795 Medicago truncatula
Medtr1g069420 1.0kb upstream 1.0kb upstream 1000 false chr1: 30032796-30033795 Medicago truncatula
Medtr1g069420 1.0kb downstream 1.0kb downstream 8020 true chr1: 30024776-30032795 Medicago truncatula
Medtr1g069420 1.0kb downstream 1.0kb downstream 1000 false chr1: 30024776-30025775 Medicago truncatula
Medtr1g069420 2.0kb upstream 2.0kb upstream 9020 true chr1: 30025776-30034795 Medicago truncatula
Medtr1g069420 2.0kb upstream 2.0kb upstream 2000 false chr1: 30032796-30034795 Medicago truncatula
Medtr1g069420 2.0kb downstream 2.0kb downstream 9020 true chr1: 30023776-30032795 Medicago truncatula
Medtr1g069420 2.0kb downstream 2.0kb downstream 2000 false chr1: 30023776-30025775 Medicago truncatula
Medtr1g069420 5.0kb upstream 5.0kb upstream 12020 true chr1: 30025776-30037795 Medicago truncatula
Medtr1g069420 5.0kb upstream 5.0kb upstream 5000 false chr1: 30032796-30037795 Medicago truncatula
Medtr1g069420 5.0kb downstream 5.0kb downstream 12020 true chr1: 30020776-30032795 Medicago truncatula
Medtr1g069420 5.0kb downstream 5.0kb downstream 5000 false chr1: 30020776-30025775 Medicago truncatula
Medtr1g069420 10.0kb upstream 10.0kb upstream 17020 true chr1: 30025776-30042795 Medicago truncatula
Medtr1g069420 10.0kb upstream 10.0kb upstream 10000 false chr1: 30032796-30042795 Medicago truncatula
Medtr1g069420 10.0kb downstream 10.0kb downstream 17020 true chr1: 30015776-30032795 Medicago truncatula
Medtr1g069420 10.0kb downstream 10.0kb downstream 10000 false chr1: 30015776-30025775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310796 5265 Fabidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722       Low
cufflinks 1.449        
cufflinks 2.1       High
cufflinks 1.318        
cufflinks 1.593        
cufflinks 0.876       Low
cufflinks 1.596        
cufflinks 1.377        
cufflinks 1.406        

0 Strain