Gene : Medtr1g087240 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Description:  alpha-L-arabinofuranosidase/beta-D-xylosidase
Genomic Order:  4807 Name:  ? Medtr1g087240
Secondary Identifier:  ? PAC:31094438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087240 0.5kb upstream 0.5kb upstream 4419 true chr1: 39087450-39091868 Medicago truncatula
Medtr1g087240 0.5kb upstream 0.5kb upstream 500 false chr1: 39087450-39087949 Medicago truncatula
Medtr1g087240 0.5kb downstream 0.5kb downstream 4419 true chr1: 39087950-39092368 Medicago truncatula
Medtr1g087240 0.5kb downstream 0.5kb downstream 500 false chr1: 39091869-39092368 Medicago truncatula
Medtr1g087240 1.0kb upstream 1.0kb upstream 4919 true chr1: 39086950-39091868 Medicago truncatula
Medtr1g087240 1.0kb upstream 1.0kb upstream 1000 false chr1: 39086950-39087949 Medicago truncatula
Medtr1g087240 1.0kb downstream 1.0kb downstream 4919 true chr1: 39087950-39092868 Medicago truncatula
Medtr1g087240 1.0kb downstream 1.0kb downstream 1000 false chr1: 39091869-39092868 Medicago truncatula
Medtr1g087240 2.0kb upstream 2.0kb upstream 5919 true chr1: 39085950-39091868 Medicago truncatula
Medtr1g087240 2.0kb upstream 2.0kb upstream 2000 false chr1: 39085950-39087949 Medicago truncatula
Medtr1g087240 2.0kb downstream 2.0kb downstream 5919 true chr1: 39087950-39093868 Medicago truncatula
Medtr1g087240 2.0kb downstream 2.0kb downstream 2000 false chr1: 39091869-39093868 Medicago truncatula
Medtr1g087240 5.0kb upstream 5.0kb upstream 8919 true chr1: 39082950-39091868 Medicago truncatula
Medtr1g087240 5.0kb upstream 5.0kb upstream 5000 false chr1: 39082950-39087949 Medicago truncatula
Medtr1g087240 5.0kb downstream 5.0kb downstream 8919 true chr1: 39087950-39096868 Medicago truncatula
Medtr1g087240 5.0kb downstream 5.0kb downstream 5000 false chr1: 39091869-39096868 Medicago truncatula
Medtr1g087240 10.0kb upstream 10.0kb upstream 13919 true chr1: 39077950-39091868 Medicago truncatula
Medtr1g087240 10.0kb upstream 10.0kb upstream 10000 false chr1: 39077950-39087949 Medicago truncatula
Medtr1g087240 10.0kb downstream 10.0kb downstream 13919 true chr1: 39087950-39101868 Medicago truncatula
Medtr1g087240 10.0kb downstream 10.0kb downstream 10000 false chr1: 39091869-39101868 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296472 5265 Fabidae View MSA
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low Low
cufflinks 0.916        
cufflinks 0.171        
cufflinks 1.737        
cufflinks 1.258        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.067        
cufflinks 0.286        
cufflinks 5.058       High

0 Strain