Gene : Medtr1g069960 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  ethylene response factor
Genomic Order:  3695 Name:  ? Medtr1g069960
Secondary Identifier:  ? PAC:31096363
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g069960 0.5kb upstream 0.5kb upstream 1327 true chr1: 30641035-30642361 Medicago truncatula
Medtr1g069960 0.5kb upstream 0.5kb upstream 500 false chr1: 30641035-30641534 Medicago truncatula
Medtr1g069960 0.5kb downstream 0.5kb downstream 1327 true chr1: 30641535-30642861 Medicago truncatula
Medtr1g069960 0.5kb downstream 0.5kb downstream 500 false chr1: 30642362-30642861 Medicago truncatula
Medtr1g069960 1.0kb upstream 1.0kb upstream 1827 true chr1: 30640535-30642361 Medicago truncatula
Medtr1g069960 1.0kb upstream 1.0kb upstream 1000 false chr1: 30640535-30641534 Medicago truncatula
Medtr1g069960 1.0kb downstream 1.0kb downstream 1827 true chr1: 30641535-30643361 Medicago truncatula
Medtr1g069960 1.0kb downstream 1.0kb downstream 1000 false chr1: 30642362-30643361 Medicago truncatula
Medtr1g069960 2.0kb upstream 2.0kb upstream 2827 true chr1: 30639535-30642361 Medicago truncatula
Medtr1g069960 2.0kb upstream 2.0kb upstream 2000 false chr1: 30639535-30641534 Medicago truncatula
Medtr1g069960 2.0kb downstream 2.0kb downstream 2827 true chr1: 30641535-30644361 Medicago truncatula
Medtr1g069960 2.0kb downstream 2.0kb downstream 2000 false chr1: 30642362-30644361 Medicago truncatula
Medtr1g069960 5.0kb upstream 5.0kb upstream 5827 true chr1: 30636535-30642361 Medicago truncatula
Medtr1g069960 5.0kb upstream 5.0kb upstream 5000 false chr1: 30636535-30641534 Medicago truncatula
Medtr1g069960 5.0kb downstream 5.0kb downstream 5827 true chr1: 30641535-30647361 Medicago truncatula
Medtr1g069960 5.0kb downstream 5.0kb downstream 5000 false chr1: 30642362-30647361 Medicago truncatula
Medtr1g069960 10.0kb upstream 10.0kb upstream 10827 true chr1: 30631535-30642361 Medicago truncatula
Medtr1g069960 10.0kb upstream 10.0kb upstream 10000 false chr1: 30631535-30641534 Medicago truncatula
Medtr1g069960 10.0kb downstream 10.0kb downstream 10827 true chr1: 30641535-30652361 Medicago truncatula
Medtr1g069960 10.0kb downstream 10.0kb downstream 10000 false chr1: 30642362-30652361 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312350 5265 Fabidae View MSA
124071371 5270 Rosid View MSA
123752918 5271 Pentapetalae View MSA
122793909 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.992     High  
cufflinks 3.202       Low
cufflinks 20.979     High  
cufflinks 52.941     High  
cufflinks 4.699       Low
cufflinks 81.847     High  
cufflinks 89.736     High High
cufflinks 11.288     High  
cufflinks 52.104     High  

0 Strain