Gene : Medtr1g071610 M. truncatula Mt4.0v1
Defline:  (1 of 3) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Description:  acetyl-CoA carboxylase, putative
Genomic Order:  3824 Name:  ? Medtr1g071610
Secondary Identifier:  ? PAC:31099669
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LEU-DEG2-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g071610 0.5kb upstream 0.5kb upstream 9763 true chr1: 31783442-31793204 Medicago truncatula
Medtr1g071610 0.5kb upstream 0.5kb upstream 500 false chr1: 31783442-31783941 Medicago truncatula
Medtr1g071610 0.5kb downstream 0.5kb downstream 9763 true chr1: 31783942-31793704 Medicago truncatula
Medtr1g071610 0.5kb downstream 0.5kb downstream 500 false chr1: 31793205-31793704 Medicago truncatula
Medtr1g071610 1.0kb upstream 1.0kb upstream 10263 true chr1: 31782942-31793204 Medicago truncatula
Medtr1g071610 1.0kb upstream 1.0kb upstream 1000 false chr1: 31782942-31783941 Medicago truncatula
Medtr1g071610 1.0kb downstream 1.0kb downstream 10263 true chr1: 31783942-31794204 Medicago truncatula
Medtr1g071610 1.0kb downstream 1.0kb downstream 1000 false chr1: 31793205-31794204 Medicago truncatula
Medtr1g071610 2.0kb upstream 2.0kb upstream 11263 true chr1: 31781942-31793204 Medicago truncatula
Medtr1g071610 2.0kb upstream 2.0kb upstream 2000 false chr1: 31781942-31783941 Medicago truncatula
Medtr1g071610 2.0kb downstream 2.0kb downstream 11263 true chr1: 31783942-31795204 Medicago truncatula
Medtr1g071610 2.0kb downstream 2.0kb downstream 2000 false chr1: 31793205-31795204 Medicago truncatula
Medtr1g071610 5.0kb upstream 5.0kb upstream 14263 true chr1: 31778942-31793204 Medicago truncatula
Medtr1g071610 5.0kb upstream 5.0kb upstream 5000 false chr1: 31778942-31783941 Medicago truncatula
Medtr1g071610 5.0kb downstream 5.0kb downstream 14263 true chr1: 31783942-31798204 Medicago truncatula
Medtr1g071610 5.0kb downstream 5.0kb downstream 5000 false chr1: 31793205-31798204 Medicago truncatula
Medtr1g071610 10.0kb upstream 10.0kb upstream 19263 true chr1: 31773942-31793204 Medicago truncatula
Medtr1g071610 10.0kb upstream 10.0kb upstream 10000 false chr1: 31773942-31783941 Medicago truncatula
Medtr1g071610 10.0kb downstream 10.0kb downstream 19263 true chr1: 31783942-31803204 Medicago truncatula
Medtr1g071610 10.0kb downstream 10.0kb downstream 10000 false chr1: 31793205-31803204 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303666 5265 Fabidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.957     High  
cufflinks 46.649     High  
cufflinks 121.15     High High
cufflinks 19.167     High  
cufflinks 28.859     High  
cufflinks 22.226     High  
cufflinks 36.13     High  
cufflinks 98.939     High High
cufflinks 15.685     High Low

0 Strain