Gene : Medtr1g073130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00595 - PDZ domain (Also known as DHR or GLGF) (PDZ) Description:  carboxy-terminal processing peptidase-like protein
Genomic Order:  3917 Name:  ? Medtr1g073130
Secondary Identifier:  ? PAC:31100516
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073130 0.5kb upstream 0.5kb upstream 7292 true chr1: 32425912-32433203 Medicago truncatula
Medtr1g073130 0.5kb upstream 0.5kb upstream 500 false chr1: 32432704-32433203 Medicago truncatula
Medtr1g073130 0.5kb downstream 0.5kb downstream 7292 true chr1: 32425412-32432703 Medicago truncatula
Medtr1g073130 0.5kb downstream 0.5kb downstream 500 false chr1: 32425412-32425911 Medicago truncatula
Medtr1g073130 1.0kb upstream 1.0kb upstream 7792 true chr1: 32425912-32433703 Medicago truncatula
Medtr1g073130 1.0kb upstream 1.0kb upstream 1000 false chr1: 32432704-32433703 Medicago truncatula
Medtr1g073130 1.0kb downstream 1.0kb downstream 7792 true chr1: 32424912-32432703 Medicago truncatula
Medtr1g073130 1.0kb downstream 1.0kb downstream 1000 false chr1: 32424912-32425911 Medicago truncatula
Medtr1g073130 2.0kb upstream 2.0kb upstream 8792 true chr1: 32425912-32434703 Medicago truncatula
Medtr1g073130 2.0kb upstream 2.0kb upstream 2000 false chr1: 32432704-32434703 Medicago truncatula
Medtr1g073130 2.0kb downstream 2.0kb downstream 8792 true chr1: 32423912-32432703 Medicago truncatula
Medtr1g073130 2.0kb downstream 2.0kb downstream 2000 false chr1: 32423912-32425911 Medicago truncatula
Medtr1g073130 5.0kb upstream 5.0kb upstream 11792 true chr1: 32425912-32437703 Medicago truncatula
Medtr1g073130 5.0kb upstream 5.0kb upstream 5000 false chr1: 32432704-32437703 Medicago truncatula
Medtr1g073130 5.0kb downstream 5.0kb downstream 11792 true chr1: 32420912-32432703 Medicago truncatula
Medtr1g073130 5.0kb downstream 5.0kb downstream 5000 false chr1: 32420912-32425911 Medicago truncatula
Medtr1g073130 10.0kb upstream 10.0kb upstream 16792 true chr1: 32425912-32442703 Medicago truncatula
Medtr1g073130 10.0kb upstream 10.0kb upstream 10000 false chr1: 32432704-32442703 Medicago truncatula
Medtr1g073130 10.0kb downstream 10.0kb downstream 16792 true chr1: 32415912-32432703 Medicago truncatula
Medtr1g073130 10.0kb downstream 10.0kb downstream 10000 false chr1: 32415912-32425911 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306257 5265 Fabidae View MSA
124060968 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.539        
cufflinks 6.991       High
cufflinks 5.329        
cufflinks 0.297       Low
cufflinks 6.976       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.294       Low
cufflinks 4.925        
cufflinks 0.399        

0 Strain