Gene : Medtr1g072650 M. truncatula Mt4.0v1
Defline:  (1 of 8) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Description:  BTB/POZ/MATH-domain protein
Genomic Order:  3895 Name:  ? Medtr1g072650
Secondary Identifier:  ? PAC:31099778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072650 0.5kb upstream 0.5kb upstream 3920 true chr1: 32262311-32266230 Medicago truncatula
Medtr1g072650 0.5kb upstream 0.5kb upstream 500 false chr1: 32265731-32266230 Medicago truncatula
Medtr1g072650 0.5kb downstream 0.5kb downstream 3920 true chr1: 32261811-32265730 Medicago truncatula
Medtr1g072650 0.5kb downstream 0.5kb downstream 500 false chr1: 32261811-32262310 Medicago truncatula
Medtr1g072650 1.0kb upstream 1.0kb upstream 4420 true chr1: 32262311-32266730 Medicago truncatula
Medtr1g072650 1.0kb upstream 1.0kb upstream 1000 false chr1: 32265731-32266730 Medicago truncatula
Medtr1g072650 1.0kb downstream 1.0kb downstream 4420 true chr1: 32261311-32265730 Medicago truncatula
Medtr1g072650 1.0kb downstream 1.0kb downstream 1000 false chr1: 32261311-32262310 Medicago truncatula
Medtr1g072650 2.0kb upstream 2.0kb upstream 5420 true chr1: 32262311-32267730 Medicago truncatula
Medtr1g072650 2.0kb upstream 2.0kb upstream 2000 false chr1: 32265731-32267730 Medicago truncatula
Medtr1g072650 2.0kb downstream 2.0kb downstream 5420 true chr1: 32260311-32265730 Medicago truncatula
Medtr1g072650 2.0kb downstream 2.0kb downstream 2000 false chr1: 32260311-32262310 Medicago truncatula
Medtr1g072650 5.0kb upstream 5.0kb upstream 8420 true chr1: 32262311-32270730 Medicago truncatula
Medtr1g072650 5.0kb upstream 5.0kb upstream 5000 false chr1: 32265731-32270730 Medicago truncatula
Medtr1g072650 5.0kb downstream 5.0kb downstream 8420 true chr1: 32257311-32265730 Medicago truncatula
Medtr1g072650 5.0kb downstream 5.0kb downstream 5000 false chr1: 32257311-32262310 Medicago truncatula
Medtr1g072650 10.0kb upstream 10.0kb upstream 13420 true chr1: 32262311-32275730 Medicago truncatula
Medtr1g072650 10.0kb upstream 10.0kb upstream 10000 false chr1: 32265731-32275730 Medicago truncatula
Medtr1g072650 10.0kb downstream 10.0kb downstream 13420 true chr1: 32252311-32265730 Medicago truncatula
Medtr1g072650 10.0kb downstream 10.0kb downstream 10000 false chr1: 32252311-32262310 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122309857 5265 Fabidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.373     High High
cufflinks 30.296     High  
cufflinks 36.981     High  
cufflinks 27.798     High  
cufflinks 30.593     High  
cufflinks 11.746     High Low
cufflinks 25.525     High  
cufflinks 33.421     High  
cufflinks 25.836     High  

0 Strain