Gene : Medtr1g081000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK1 Description:  Serine/Threonine-kinase Nek4
Genomic Order:  4413 Name:  ? Medtr1g081000
Secondary Identifier:  ? PAC:31093722
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g081000 0.5kb upstream 0.5kb upstream 6726 true chr1: 36065462-36072187 Medicago truncatula
Medtr1g081000 0.5kb upstream 0.5kb upstream 500 false chr1: 36071688-36072187 Medicago truncatula
Medtr1g081000 0.5kb downstream 0.5kb downstream 6726 true chr1: 36064962-36071687 Medicago truncatula
Medtr1g081000 0.5kb downstream 0.5kb downstream 500 false chr1: 36064962-36065461 Medicago truncatula
Medtr1g081000 1.0kb upstream 1.0kb upstream 7226 true chr1: 36065462-36072687 Medicago truncatula
Medtr1g081000 1.0kb upstream 1.0kb upstream 1000 false chr1: 36071688-36072687 Medicago truncatula
Medtr1g081000 1.0kb downstream 1.0kb downstream 7226 true chr1: 36064462-36071687 Medicago truncatula
Medtr1g081000 1.0kb downstream 1.0kb downstream 1000 false chr1: 36064462-36065461 Medicago truncatula
Medtr1g081000 2.0kb upstream 2.0kb upstream 8226 true chr1: 36065462-36073687 Medicago truncatula
Medtr1g081000 2.0kb upstream 2.0kb upstream 2000 false chr1: 36071688-36073687 Medicago truncatula
Medtr1g081000 2.0kb downstream 2.0kb downstream 8226 true chr1: 36063462-36071687 Medicago truncatula
Medtr1g081000 2.0kb downstream 2.0kb downstream 2000 false chr1: 36063462-36065461 Medicago truncatula
Medtr1g081000 5.0kb upstream 5.0kb upstream 11226 true chr1: 36065462-36076687 Medicago truncatula
Medtr1g081000 5.0kb upstream 5.0kb upstream 5000 false chr1: 36071688-36076687 Medicago truncatula
Medtr1g081000 5.0kb downstream 5.0kb downstream 11226 true chr1: 36060462-36071687 Medicago truncatula
Medtr1g081000 5.0kb downstream 5.0kb downstream 5000 false chr1: 36060462-36065461 Medicago truncatula
Medtr1g081000 10.0kb upstream 10.0kb upstream 16226 true chr1: 36065462-36081687 Medicago truncatula
Medtr1g081000 10.0kb upstream 10.0kb upstream 10000 false chr1: 36071688-36081687 Medicago truncatula
Medtr1g081000 10.0kb downstream 10.0kb downstream 16226 true chr1: 36055462-36071687 Medicago truncatula
Medtr1g081000 10.0kb downstream 10.0kb downstream 10000 false chr1: 36055462-36065461 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314713 5265 Fabidae View MSA
124070127 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.652        
cufflinks 1.579        
cufflinks 1.269        
cufflinks 0.694        
cufflinks 1.918       High
cufflinks 0.229       Low
cufflinks 1.02        
cufflinks 1.317        
cufflinks 1.2        

0 Strain