Gene : Medtr1g080990 M. truncatula Mt4.0v1
Description:  MtN26 Genomic Order:  4412
Name:  ? Medtr1g080990 Secondary Identifier:  ? PAC:31096833
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080990 0.5kb upstream 0.5kb upstream 2471 true chr1: 36060795-36063265 Medicago truncatula
Medtr1g080990 0.5kb upstream 0.5kb upstream 500 false chr1: 36062766-36063265 Medicago truncatula
Medtr1g080990 0.5kb downstream 0.5kb downstream 2471 true chr1: 36060295-36062765 Medicago truncatula
Medtr1g080990 0.5kb downstream 0.5kb downstream 500 false chr1: 36060295-36060794 Medicago truncatula
Medtr1g080990 1.0kb upstream 1.0kb upstream 2971 true chr1: 36060795-36063765 Medicago truncatula
Medtr1g080990 1.0kb upstream 1.0kb upstream 1000 false chr1: 36062766-36063765 Medicago truncatula
Medtr1g080990 1.0kb downstream 1.0kb downstream 2971 true chr1: 36059795-36062765 Medicago truncatula
Medtr1g080990 1.0kb downstream 1.0kb downstream 1000 false chr1: 36059795-36060794 Medicago truncatula
Medtr1g080990 2.0kb upstream 2.0kb upstream 3971 true chr1: 36060795-36064765 Medicago truncatula
Medtr1g080990 2.0kb upstream 2.0kb upstream 2000 false chr1: 36062766-36064765 Medicago truncatula
Medtr1g080990 2.0kb downstream 2.0kb downstream 3971 true chr1: 36058795-36062765 Medicago truncatula
Medtr1g080990 2.0kb downstream 2.0kb downstream 2000 false chr1: 36058795-36060794 Medicago truncatula
Medtr1g080990 5.0kb upstream 5.0kb upstream 6971 true chr1: 36060795-36067765 Medicago truncatula
Medtr1g080990 5.0kb upstream 5.0kb upstream 5000 false chr1: 36062766-36067765 Medicago truncatula
Medtr1g080990 5.0kb downstream 5.0kb downstream 6971 true chr1: 36055795-36062765 Medicago truncatula
Medtr1g080990 5.0kb downstream 5.0kb downstream 5000 false chr1: 36055795-36060794 Medicago truncatula
Medtr1g080990 10.0kb upstream 10.0kb upstream 11971 true chr1: 36060795-36072765 Medicago truncatula
Medtr1g080990 10.0kb upstream 10.0kb upstream 10000 false chr1: 36062766-36072765 Medicago truncatula
Medtr1g080990 10.0kb downstream 10.0kb downstream 11971 true chr1: 36050795-36062765 Medicago truncatula
Medtr1g080990 10.0kb downstream 10.0kb downstream 10000 false chr1: 36050795-36060794 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308168 5265 Fabidae View MSA
124070152 5270 Rosid View MSA
123752746 5271 Pentapetalae View MSA
122794877 5272 Eudicot View MSA
122051586 5273 Angiosperm View MSA
121351518 5274 Embryophyte View MSA
123382201 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.313        
cufflinks 0.428        
cufflinks 0.299        
cufflinks 1.116        
cufflinks 0.113       Low
cufflinks 1.923        
cufflinks 16.802     High High
cufflinks 0.35        
cufflinks 1.513        

0 Strain