Gene : Medtr1g080960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 Description:  PITH domain plant protein
Genomic Order:  4411 Name:  ? Medtr1g080960
Secondary Identifier:  ? PAC:31092583
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080960 0.5kb upstream 0.5kb upstream 3886 true chr1: 36038768-36042653 Medicago truncatula
Medtr1g080960 0.5kb upstream 0.5kb upstream 500 false chr1: 36042154-36042653 Medicago truncatula
Medtr1g080960 0.5kb downstream 0.5kb downstream 3886 true chr1: 36038268-36042153 Medicago truncatula
Medtr1g080960 0.5kb downstream 0.5kb downstream 500 false chr1: 36038268-36038767 Medicago truncatula
Medtr1g080960 1.0kb upstream 1.0kb upstream 4386 true chr1: 36038768-36043153 Medicago truncatula
Medtr1g080960 1.0kb upstream 1.0kb upstream 1000 false chr1: 36042154-36043153 Medicago truncatula
Medtr1g080960 1.0kb downstream 1.0kb downstream 4386 true chr1: 36037768-36042153 Medicago truncatula
Medtr1g080960 1.0kb downstream 1.0kb downstream 1000 false chr1: 36037768-36038767 Medicago truncatula
Medtr1g080960 2.0kb upstream 2.0kb upstream 5386 true chr1: 36038768-36044153 Medicago truncatula
Medtr1g080960 2.0kb upstream 2.0kb upstream 2000 false chr1: 36042154-36044153 Medicago truncatula
Medtr1g080960 2.0kb downstream 2.0kb downstream 5386 true chr1: 36036768-36042153 Medicago truncatula
Medtr1g080960 2.0kb downstream 2.0kb downstream 2000 false chr1: 36036768-36038767 Medicago truncatula
Medtr1g080960 5.0kb upstream 5.0kb upstream 8386 true chr1: 36038768-36047153 Medicago truncatula
Medtr1g080960 5.0kb upstream 5.0kb upstream 5000 false chr1: 36042154-36047153 Medicago truncatula
Medtr1g080960 5.0kb downstream 5.0kb downstream 8386 true chr1: 36033768-36042153 Medicago truncatula
Medtr1g080960 5.0kb downstream 5.0kb downstream 5000 false chr1: 36033768-36038767 Medicago truncatula
Medtr1g080960 10.0kb upstream 10.0kb upstream 13386 true chr1: 36038768-36052153 Medicago truncatula
Medtr1g080960 10.0kb upstream 10.0kb upstream 10000 false chr1: 36042154-36052153 Medicago truncatula
Medtr1g080960 10.0kb downstream 10.0kb downstream 13386 true chr1: 36028768-36042153 Medicago truncatula
Medtr1g080960 10.0kb downstream 10.0kb downstream 10000 false chr1: 36028768-36038767 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299289 5265 Fabidae View MSA
124066560 5270 Rosid View MSA
123737350 5271 Pentapetalae View MSA
122790489 5272 Eudicot View MSA
122044030 5273 Angiosperm View MSA
121346972 5274 Embryophyte View MSA
123424036 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.913     High  
cufflinks 8.593        
cufflinks 8.82        
cufflinks 8.682        
cufflinks 10.054        
cufflinks 8.632        
cufflinks 14.142     High High
cufflinks 7.441       Low
cufflinks 9.195        

0 Strain