Gene : Medtr1g080910 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33162:SF1 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC Description:  twin arginine translocase
Genomic Order:  4407 Name:  ? Medtr1g080910
Secondary Identifier:  ? PAC:31096914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080910 0.5kb upstream 0.5kb upstream 1578 true chr1: 36003563-36005140 Medicago truncatula
Medtr1g080910 0.5kb upstream 0.5kb upstream 500 false chr1: 36004641-36005140 Medicago truncatula
Medtr1g080910 0.5kb downstream 0.5kb downstream 1578 true chr1: 36003063-36004640 Medicago truncatula
Medtr1g080910 0.5kb downstream 0.5kb downstream 500 false chr1: 36003063-36003562 Medicago truncatula
Medtr1g080910 1.0kb upstream 1.0kb upstream 2078 true chr1: 36003563-36005640 Medicago truncatula
Medtr1g080910 1.0kb upstream 1.0kb upstream 1000 false chr1: 36004641-36005640 Medicago truncatula
Medtr1g080910 1.0kb downstream 1.0kb downstream 2078 true chr1: 36002563-36004640 Medicago truncatula
Medtr1g080910 1.0kb downstream 1.0kb downstream 1000 false chr1: 36002563-36003562 Medicago truncatula
Medtr1g080910 2.0kb upstream 2.0kb upstream 3078 true chr1: 36003563-36006640 Medicago truncatula
Medtr1g080910 2.0kb upstream 2.0kb upstream 2000 false chr1: 36004641-36006640 Medicago truncatula
Medtr1g080910 2.0kb downstream 2.0kb downstream 3078 true chr1: 36001563-36004640 Medicago truncatula
Medtr1g080910 2.0kb downstream 2.0kb downstream 2000 false chr1: 36001563-36003562 Medicago truncatula
Medtr1g080910 5.0kb upstream 5.0kb upstream 6078 true chr1: 36003563-36009640 Medicago truncatula
Medtr1g080910 5.0kb upstream 5.0kb upstream 5000 false chr1: 36004641-36009640 Medicago truncatula
Medtr1g080910 5.0kb downstream 5.0kb downstream 6078 true chr1: 35998563-36004640 Medicago truncatula
Medtr1g080910 5.0kb downstream 5.0kb downstream 5000 false chr1: 35998563-36003562 Medicago truncatula
Medtr1g080910 10.0kb upstream 10.0kb upstream 11078 true chr1: 36003563-36014640 Medicago truncatula
Medtr1g080910 10.0kb upstream 10.0kb upstream 10000 false chr1: 36004641-36014640 Medicago truncatula
Medtr1g080910 10.0kb downstream 10.0kb downstream 11078 true chr1: 35993563-36004640 Medicago truncatula
Medtr1g080910 10.0kb downstream 10.0kb downstream 10000 false chr1: 35993563-36003562 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311310 5265 Fabidae View MSA
124067421 5270 Rosid View MSA
123742518 5271 Pentapetalae View MSA
122797436 5272 Eudicot View MSA
122042839 5273 Angiosperm View MSA
123429010 5275 Viridiplantae View MSA
121350142 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.312       Low
cufflinks 26.131     High  
cufflinks 22.665     High  
cufflinks 4.177        
cufflinks 57.504     High High
cufflinks 1.726       Low
cufflinks 5.032        
cufflinks 29.642     High  
cufflinks 5.535        

0 Strain