Gene : Medtr1g080690 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31358:SF4 - PROTEIN WAVE-DAMPENED 2-RELATED Description:  TPX2 (targeting protein for Xklp2) family protein
Genomic Order:  4392 Name:  ? Medtr1g080690
Secondary Identifier:  ? PAC:31098407
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080690 0.5kb upstream 0.5kb upstream 4043 true chr1: 35884032-35888074 Medicago truncatula
Medtr1g080690 0.5kb upstream 0.5kb upstream 500 false chr1: 35884032-35884531 Medicago truncatula
Medtr1g080690 0.5kb downstream 0.5kb downstream 4043 true chr1: 35884532-35888574 Medicago truncatula
Medtr1g080690 0.5kb downstream 0.5kb downstream 500 false chr1: 35888075-35888574 Medicago truncatula
Medtr1g080690 1.0kb upstream 1.0kb upstream 4543 true chr1: 35883532-35888074 Medicago truncatula
Medtr1g080690 1.0kb upstream 1.0kb upstream 1000 false chr1: 35883532-35884531 Medicago truncatula
Medtr1g080690 1.0kb downstream 1.0kb downstream 4543 true chr1: 35884532-35889074 Medicago truncatula
Medtr1g080690 1.0kb downstream 1.0kb downstream 1000 false chr1: 35888075-35889074 Medicago truncatula
Medtr1g080690 2.0kb upstream 2.0kb upstream 5543 true chr1: 35882532-35888074 Medicago truncatula
Medtr1g080690 2.0kb upstream 2.0kb upstream 2000 false chr1: 35882532-35884531 Medicago truncatula
Medtr1g080690 2.0kb downstream 2.0kb downstream 5543 true chr1: 35884532-35890074 Medicago truncatula
Medtr1g080690 2.0kb downstream 2.0kb downstream 2000 false chr1: 35888075-35890074 Medicago truncatula
Medtr1g080690 5.0kb upstream 5.0kb upstream 8543 true chr1: 35879532-35888074 Medicago truncatula
Medtr1g080690 5.0kb upstream 5.0kb upstream 5000 false chr1: 35879532-35884531 Medicago truncatula
Medtr1g080690 5.0kb downstream 5.0kb downstream 8543 true chr1: 35884532-35893074 Medicago truncatula
Medtr1g080690 5.0kb downstream 5.0kb downstream 5000 false chr1: 35888075-35893074 Medicago truncatula
Medtr1g080690 10.0kb upstream 10.0kb upstream 13543 true chr1: 35874532-35888074 Medicago truncatula
Medtr1g080690 10.0kb upstream 10.0kb upstream 10000 false chr1: 35874532-35884531 Medicago truncatula
Medtr1g080690 10.0kb downstream 10.0kb downstream 13543 true chr1: 35884532-35898074 Medicago truncatula
Medtr1g080690 10.0kb downstream 10.0kb downstream 10000 false chr1: 35888075-35898074 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301422 5265 Fabidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.24       High
cufflinks 5.942        
cufflinks 5.437        
cufflinks 5.899        
cufflinks 7.468        
cufflinks 4.674       Low
cufflinks 7.186        
cufflinks 7.015        
cufflinks 8.78       High

0 Strain