Gene : Medtr1g080800 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22595:SF62 - HEVEIN-LIKE PREPROPROTEIN Description:  Chitinase / Hevein / PR-4 / Wheatwin2
Genomic Order:  4400 Name:  ? Medtr1g080800
Secondary Identifier:  ? PAC:31099179
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080800 0.5kb upstream 0.5kb upstream 1493 true chr1: 35939136-35940628 Medicago truncatula
Medtr1g080800 0.5kb upstream 0.5kb upstream 500 false chr1: 35940129-35940628 Medicago truncatula
Medtr1g080800 0.5kb downstream 0.5kb downstream 1493 true chr1: 35938636-35940128 Medicago truncatula
Medtr1g080800 0.5kb downstream 0.5kb downstream 500 false chr1: 35938636-35939135 Medicago truncatula
Medtr1g080800 1.0kb upstream 1.0kb upstream 1993 true chr1: 35939136-35941128 Medicago truncatula
Medtr1g080800 1.0kb upstream 1.0kb upstream 1000 false chr1: 35940129-35941128 Medicago truncatula
Medtr1g080800 1.0kb downstream 1.0kb downstream 1993 true chr1: 35938136-35940128 Medicago truncatula
Medtr1g080800 1.0kb downstream 1.0kb downstream 1000 false chr1: 35938136-35939135 Medicago truncatula
Medtr1g080800 2.0kb upstream 2.0kb upstream 2993 true chr1: 35939136-35942128 Medicago truncatula
Medtr1g080800 2.0kb upstream 2.0kb upstream 2000 false chr1: 35940129-35942128 Medicago truncatula
Medtr1g080800 2.0kb downstream 2.0kb downstream 2993 true chr1: 35937136-35940128 Medicago truncatula
Medtr1g080800 2.0kb downstream 2.0kb downstream 2000 false chr1: 35937136-35939135 Medicago truncatula
Medtr1g080800 5.0kb upstream 5.0kb upstream 5993 true chr1: 35939136-35945128 Medicago truncatula
Medtr1g080800 5.0kb upstream 5.0kb upstream 5000 false chr1: 35940129-35945128 Medicago truncatula
Medtr1g080800 5.0kb downstream 5.0kb downstream 5993 true chr1: 35934136-35940128 Medicago truncatula
Medtr1g080800 5.0kb downstream 5.0kb downstream 5000 false chr1: 35934136-35939135 Medicago truncatula
Medtr1g080800 10.0kb upstream 10.0kb upstream 10993 true chr1: 35939136-35950128 Medicago truncatula
Medtr1g080800 10.0kb upstream 10.0kb upstream 10000 false chr1: 35940129-35950128 Medicago truncatula
Medtr1g080800 10.0kb downstream 10.0kb downstream 10993 true chr1: 35929136-35940128 Medicago truncatula
Medtr1g080800 10.0kb downstream 10.0kb downstream 10000 false chr1: 35929136-35939135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311692 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.183     High  
cufflinks 31.024     High  
cufflinks 8.431        
cufflinks 148.631     High High
cufflinks 10.454     High  
cufflinks 64.589     High  
cufflinks 61.733     High  
cufflinks 24.141     High  
cufflinks 3.922       Low

0 Strain