Gene : Medtr1g082210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23024:SF227 - GIBBERELLIN RECEPTOR GID1A-RELATED Description:  gibberellin receptor GID1c-like protein
Genomic Order:  4467 Name:  ? Medtr1g082210
Secondary Identifier:  ? PAC:31096186
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6303 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082210 0.5kb upstream 0.5kb upstream 3074 true chr1: 36555811-36558884 Medicago truncatula
Medtr1g082210 0.5kb upstream 0.5kb upstream 500 false chr1: 36555811-36556310 Medicago truncatula
Medtr1g082210 0.5kb downstream 0.5kb downstream 3074 true chr1: 36556311-36559384 Medicago truncatula
Medtr1g082210 0.5kb downstream 0.5kb downstream 500 false chr1: 36558885-36559384 Medicago truncatula
Medtr1g082210 1.0kb upstream 1.0kb upstream 3574 true chr1: 36555311-36558884 Medicago truncatula
Medtr1g082210 1.0kb upstream 1.0kb upstream 1000 false chr1: 36555311-36556310 Medicago truncatula
Medtr1g082210 1.0kb downstream 1.0kb downstream 3574 true chr1: 36556311-36559884 Medicago truncatula
Medtr1g082210 1.0kb downstream 1.0kb downstream 1000 false chr1: 36558885-36559884 Medicago truncatula
Medtr1g082210 2.0kb upstream 2.0kb upstream 4574 true chr1: 36554311-36558884 Medicago truncatula
Medtr1g082210 2.0kb upstream 2.0kb upstream 2000 false chr1: 36554311-36556310 Medicago truncatula
Medtr1g082210 2.0kb downstream 2.0kb downstream 4574 true chr1: 36556311-36560884 Medicago truncatula
Medtr1g082210 2.0kb downstream 2.0kb downstream 2000 false chr1: 36558885-36560884 Medicago truncatula
Medtr1g082210 5.0kb upstream 5.0kb upstream 7574 true chr1: 36551311-36558884 Medicago truncatula
Medtr1g082210 5.0kb upstream 5.0kb upstream 5000 false chr1: 36551311-36556310 Medicago truncatula
Medtr1g082210 5.0kb downstream 5.0kb downstream 7574 true chr1: 36556311-36563884 Medicago truncatula
Medtr1g082210 5.0kb downstream 5.0kb downstream 5000 false chr1: 36558885-36563884 Medicago truncatula
Medtr1g082210 10.0kb upstream 10.0kb upstream 12574 true chr1: 36546311-36558884 Medicago truncatula
Medtr1g082210 10.0kb upstream 10.0kb upstream 10000 false chr1: 36546311-36556310 Medicago truncatula
Medtr1g082210 10.0kb downstream 10.0kb downstream 12574 true chr1: 36556311-36568884 Medicago truncatula
Medtr1g082210 10.0kb downstream 10.0kb downstream 10000 false chr1: 36558885-36568884 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306678 5265 Fabidae View MSA
124068362 5270 Rosid View MSA
123741426 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.641       Low
cufflinks 13.151     High  
cufflinks 13.814     High  
cufflinks 8.286        
cufflinks 19.049     High High
cufflinks 1.648       Low
cufflinks 4.41        
cufflinks 11.706     High  
cufflinks 5.148        

0 Strain