Gene : Medtr1g081790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF335 - SERINE-THREONINE PROTEIN KINASE Description:  MAP kinase kinase kinase-like protein
Genomic Order:  4451 Name:  ? Medtr1g081790
Secondary Identifier:  ? PAC:31096410
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g081790 0.5kb upstream 0.5kb upstream 9368 true chr1: 36400484-36409851 Medicago truncatula
Medtr1g081790 0.5kb upstream 0.5kb upstream 500 false chr1: 36400484-36400983 Medicago truncatula
Medtr1g081790 0.5kb downstream 0.5kb downstream 9368 true chr1: 36400984-36410351 Medicago truncatula
Medtr1g081790 0.5kb downstream 0.5kb downstream 500 false chr1: 36409852-36410351 Medicago truncatula
Medtr1g081790 1.0kb upstream 1.0kb upstream 9868 true chr1: 36399984-36409851 Medicago truncatula
Medtr1g081790 1.0kb upstream 1.0kb upstream 1000 false chr1: 36399984-36400983 Medicago truncatula
Medtr1g081790 1.0kb downstream 1.0kb downstream 9868 true chr1: 36400984-36410851 Medicago truncatula
Medtr1g081790 1.0kb downstream 1.0kb downstream 1000 false chr1: 36409852-36410851 Medicago truncatula
Medtr1g081790 2.0kb upstream 2.0kb upstream 10868 true chr1: 36398984-36409851 Medicago truncatula
Medtr1g081790 2.0kb upstream 2.0kb upstream 2000 false chr1: 36398984-36400983 Medicago truncatula
Medtr1g081790 2.0kb downstream 2.0kb downstream 10868 true chr1: 36400984-36411851 Medicago truncatula
Medtr1g081790 2.0kb downstream 2.0kb downstream 2000 false chr1: 36409852-36411851 Medicago truncatula
Medtr1g081790 5.0kb upstream 5.0kb upstream 13868 true chr1: 36395984-36409851 Medicago truncatula
Medtr1g081790 5.0kb upstream 5.0kb upstream 5000 false chr1: 36395984-36400983 Medicago truncatula
Medtr1g081790 5.0kb downstream 5.0kb downstream 13868 true chr1: 36400984-36414851 Medicago truncatula
Medtr1g081790 5.0kb downstream 5.0kb downstream 5000 false chr1: 36409852-36414851 Medicago truncatula
Medtr1g081790 10.0kb upstream 10.0kb upstream 18868 true chr1: 36390984-36409851 Medicago truncatula
Medtr1g081790 10.0kb upstream 10.0kb upstream 10000 false chr1: 36390984-36400983 Medicago truncatula
Medtr1g081790 10.0kb downstream 10.0kb downstream 18868 true chr1: 36400984-36419851 Medicago truncatula
Medtr1g081790 10.0kb downstream 10.0kb downstream 10000 false chr1: 36409852-36419851 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309694 5265 Fabidae View MSA
124069123 5270 Rosid View MSA
123738412 5271 Pentapetalae View MSA
122795916 5272 Eudicot View MSA
122044929 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121347926 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75        
cufflinks 3.638        
cufflinks 3.748        
cufflinks 1.987       Low
cufflinks 2.579        
cufflinks 1.856       Low
cufflinks 5.446       High
cufflinks 3.489        
cufflinks 4.887        

0 Strain