Gene : Medtr1g082660 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Description:  nuclear transcription factor Y protein
Genomic Order:  4499 Name:  ? Medtr1g082660
Secondary Identifier:  ? PAC:31096266
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082660 0.5kb upstream 0.5kb upstream 2952 true chr1: 36797752-36800703 Medicago truncatula
Medtr1g082660 0.5kb upstream 0.5kb upstream 500 false chr1: 36797752-36798251 Medicago truncatula
Medtr1g082660 0.5kb downstream 0.5kb downstream 2952 true chr1: 36798252-36801203 Medicago truncatula
Medtr1g082660 0.5kb downstream 0.5kb downstream 500 false chr1: 36800704-36801203 Medicago truncatula
Medtr1g082660 1.0kb upstream 1.0kb upstream 3452 true chr1: 36797252-36800703 Medicago truncatula
Medtr1g082660 1.0kb upstream 1.0kb upstream 1000 false chr1: 36797252-36798251 Medicago truncatula
Medtr1g082660 1.0kb downstream 1.0kb downstream 3452 true chr1: 36798252-36801703 Medicago truncatula
Medtr1g082660 1.0kb downstream 1.0kb downstream 1000 false chr1: 36800704-36801703 Medicago truncatula
Medtr1g082660 2.0kb upstream 2.0kb upstream 4452 true chr1: 36796252-36800703 Medicago truncatula
Medtr1g082660 2.0kb upstream 2.0kb upstream 2000 false chr1: 36796252-36798251 Medicago truncatula
Medtr1g082660 2.0kb downstream 2.0kb downstream 4452 true chr1: 36798252-36802703 Medicago truncatula
Medtr1g082660 2.0kb downstream 2.0kb downstream 2000 false chr1: 36800704-36802703 Medicago truncatula
Medtr1g082660 5.0kb upstream 5.0kb upstream 7452 true chr1: 36793252-36800703 Medicago truncatula
Medtr1g082660 5.0kb upstream 5.0kb upstream 5000 false chr1: 36793252-36798251 Medicago truncatula
Medtr1g082660 5.0kb downstream 5.0kb downstream 7452 true chr1: 36798252-36805703 Medicago truncatula
Medtr1g082660 5.0kb downstream 5.0kb downstream 5000 false chr1: 36800704-36805703 Medicago truncatula
Medtr1g082660 10.0kb upstream 10.0kb upstream 12452 true chr1: 36788252-36800703 Medicago truncatula
Medtr1g082660 10.0kb upstream 10.0kb upstream 10000 false chr1: 36788252-36798251 Medicago truncatula
Medtr1g082660 10.0kb downstream 10.0kb downstream 12452 true chr1: 36798252-36810703 Medicago truncatula
Medtr1g082660 10.0kb downstream 10.0kb downstream 10000 false chr1: 36800704-36810703 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295494 5265 Fabidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.223       High
cufflinks 5.237        
cufflinks 5.046        
cufflinks 6.993        
cufflinks 6.3        
cufflinks 1.843       Low
cufflinks 6.559        
cufflinks 4.671        
cufflinks 7.499        

0 Strain