Gene : Medtr1g082480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11969:SF26 - TRANSCRIPTION FACTOR BHLH99 Description:  basic helix loop helix (BHLH) DNA-binding family protein
Genomic Order:  4489 Name:  ? Medtr1g082480
Secondary Identifier:  ? PAC:31093794
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082480 0.5kb upstream 0.5kb upstream 2888 true chr1: 36674657-36677544 Medicago truncatula
Medtr1g082480 0.5kb upstream 0.5kb upstream 500 false chr1: 36677045-36677544 Medicago truncatula
Medtr1g082480 0.5kb downstream 0.5kb downstream 2888 true chr1: 36674157-36677044 Medicago truncatula
Medtr1g082480 0.5kb downstream 0.5kb downstream 500 false chr1: 36674157-36674656 Medicago truncatula
Medtr1g082480 1.0kb upstream 1.0kb upstream 3388 true chr1: 36674657-36678044 Medicago truncatula
Medtr1g082480 1.0kb upstream 1.0kb upstream 1000 false chr1: 36677045-36678044 Medicago truncatula
Medtr1g082480 1.0kb downstream 1.0kb downstream 3388 true chr1: 36673657-36677044 Medicago truncatula
Medtr1g082480 1.0kb downstream 1.0kb downstream 1000 false chr1: 36673657-36674656 Medicago truncatula
Medtr1g082480 2.0kb upstream 2.0kb upstream 4388 true chr1: 36674657-36679044 Medicago truncatula
Medtr1g082480 2.0kb upstream 2.0kb upstream 2000 false chr1: 36677045-36679044 Medicago truncatula
Medtr1g082480 2.0kb downstream 2.0kb downstream 4388 true chr1: 36672657-36677044 Medicago truncatula
Medtr1g082480 2.0kb downstream 2.0kb downstream 2000 false chr1: 36672657-36674656 Medicago truncatula
Medtr1g082480 5.0kb upstream 5.0kb upstream 7388 true chr1: 36674657-36682044 Medicago truncatula
Medtr1g082480 5.0kb upstream 5.0kb upstream 5000 false chr1: 36677045-36682044 Medicago truncatula
Medtr1g082480 5.0kb downstream 5.0kb downstream 7388 true chr1: 36669657-36677044 Medicago truncatula
Medtr1g082480 5.0kb downstream 5.0kb downstream 5000 false chr1: 36669657-36674656 Medicago truncatula
Medtr1g082480 10.0kb upstream 10.0kb upstream 12388 true chr1: 36674657-36687044 Medicago truncatula
Medtr1g082480 10.0kb upstream 10.0kb upstream 10000 false chr1: 36677045-36687044 Medicago truncatula
Medtr1g082480 10.0kb downstream 10.0kb downstream 12388 true chr1: 36664657-36677044 Medicago truncatula
Medtr1g082480 10.0kb downstream 10.0kb downstream 10000 false chr1: 36664657-36674656 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311835 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.317        
cufflinks 0.003     Low Low
cufflinks 0.003     Low Low
cufflinks 2.243        
cufflinks 0.02     Low  
cufflinks 0.976        
cufflinks 3.103        
cufflinks 0.006     Low Low
cufflinks 1.858        

0 Strain