Gene : Medtr1g082570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12749 - EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 Description:  DNA excision repair protein ERCC-1
Genomic Order:  4495 Name:  ? Medtr1g082570
Secondary Identifier:  ? PAC:31094888
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082570 0.5kb upstream 0.5kb upstream 4708 true chr1: 36742510-36747217 Medicago truncatula
Medtr1g082570 0.5kb upstream 0.5kb upstream 500 false chr1: 36742510-36743009 Medicago truncatula
Medtr1g082570 0.5kb downstream 0.5kb downstream 4708 true chr1: 36743010-36747717 Medicago truncatula
Medtr1g082570 0.5kb downstream 0.5kb downstream 500 false chr1: 36747218-36747717 Medicago truncatula
Medtr1g082570 1.0kb upstream 1.0kb upstream 5208 true chr1: 36742010-36747217 Medicago truncatula
Medtr1g082570 1.0kb upstream 1.0kb upstream 1000 false chr1: 36742010-36743009 Medicago truncatula
Medtr1g082570 1.0kb downstream 1.0kb downstream 5208 true chr1: 36743010-36748217 Medicago truncatula
Medtr1g082570 1.0kb downstream 1.0kb downstream 1000 false chr1: 36747218-36748217 Medicago truncatula
Medtr1g082570 2.0kb upstream 2.0kb upstream 6208 true chr1: 36741010-36747217 Medicago truncatula
Medtr1g082570 2.0kb upstream 2.0kb upstream 2000 false chr1: 36741010-36743009 Medicago truncatula
Medtr1g082570 2.0kb downstream 2.0kb downstream 6208 true chr1: 36743010-36749217 Medicago truncatula
Medtr1g082570 2.0kb downstream 2.0kb downstream 2000 false chr1: 36747218-36749217 Medicago truncatula
Medtr1g082570 5.0kb upstream 5.0kb upstream 9208 true chr1: 36738010-36747217 Medicago truncatula
Medtr1g082570 5.0kb upstream 5.0kb upstream 5000 false chr1: 36738010-36743009 Medicago truncatula
Medtr1g082570 5.0kb downstream 5.0kb downstream 9208 true chr1: 36743010-36752217 Medicago truncatula
Medtr1g082570 5.0kb downstream 5.0kb downstream 5000 false chr1: 36747218-36752217 Medicago truncatula
Medtr1g082570 10.0kb upstream 10.0kb upstream 14208 true chr1: 36733010-36747217 Medicago truncatula
Medtr1g082570 10.0kb upstream 10.0kb upstream 10000 false chr1: 36733010-36743009 Medicago truncatula
Medtr1g082570 10.0kb downstream 10.0kb downstream 14208 true chr1: 36743010-36757217 Medicago truncatula
Medtr1g082570 10.0kb downstream 10.0kb downstream 10000 false chr1: 36747218-36757217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303224 5265 Fabidae View MSA
124066559 5270 Rosid View MSA
123737106 5271 Pentapetalae View MSA
122787410 5272 Eudicot View MSA
122045728 5273 Angiosperm View MSA
121344888 5274 Embryophyte View MSA
123427474 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.517       High
cufflinks 1.18        
cufflinks 1.565        
cufflinks 0.659       Low
cufflinks 1.412        
cufflinks 1.206        
cufflinks 2.462       High
cufflinks 1.036        
cufflinks 1.151        

0 Strain