Gene : Medtr1g082380 M. truncatula Mt4.0v1

Defline:  (1 of 1) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Description:  protein translocase family protein
Genomic Order:  4478 Name:  ? Medtr1g082380
Secondary Identifier:  ? PAC:31095995

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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082380 0.5kb upstream 0.5kb upstream 6730 true chr1: 36623273-36630002 Medicago truncatula
Medtr1g082380 0.5kb upstream 0.5kb upstream 500 false chr1: 36629503-36630002 Medicago truncatula
Medtr1g082380 0.5kb downstream 0.5kb downstream 6730 true chr1: 36622773-36629502 Medicago truncatula
Medtr1g082380 0.5kb downstream 0.5kb downstream 500 false chr1: 36622773-36623272 Medicago truncatula
Medtr1g082380 1.0kb upstream 1.0kb upstream 7230 true chr1: 36623273-36630502 Medicago truncatula
Medtr1g082380 1.0kb upstream 1.0kb upstream 1000 false chr1: 36629503-36630502 Medicago truncatula
Medtr1g082380 1.0kb downstream 1.0kb downstream 7230 true chr1: 36622273-36629502 Medicago truncatula
Medtr1g082380 1.0kb downstream 1.0kb downstream 1000 false chr1: 36622273-36623272 Medicago truncatula
Medtr1g082380 2.0kb upstream 2.0kb upstream 8230 true chr1: 36623273-36631502 Medicago truncatula
Medtr1g082380 2.0kb upstream 2.0kb upstream 2000 false chr1: 36629503-36631502 Medicago truncatula
Medtr1g082380 2.0kb downstream 2.0kb downstream 8230 true chr1: 36621273-36629502 Medicago truncatula
Medtr1g082380 2.0kb downstream 2.0kb downstream 2000 false chr1: 36621273-36623272 Medicago truncatula
Medtr1g082380 5.0kb upstream 5.0kb upstream 11230 true chr1: 36623273-36634502 Medicago truncatula
Medtr1g082380 5.0kb upstream 5.0kb upstream 5000 false chr1: 36629503-36634502 Medicago truncatula
Medtr1g082380 5.0kb downstream 5.0kb downstream 11230 true chr1: 36618273-36629502 Medicago truncatula
Medtr1g082380 5.0kb downstream 5.0kb downstream 5000 false chr1: 36618273-36623272 Medicago truncatula
Medtr1g082380 10.0kb upstream 10.0kb upstream 16230 true chr1: 36623273-36639502 Medicago truncatula
Medtr1g082380 10.0kb upstream 10.0kb upstream 10000 false chr1: 36629503-36639502 Medicago truncatula
Medtr1g082380 10.0kb downstream 10.0kb downstream 16230 true chr1: 36613273-36629502 Medicago truncatula
Medtr1g082380 10.0kb downstream 10.0kb downstream 10000 false chr1: 36613273-36623272 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314731 5265 Fabidae View MSA
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131        
cufflinks 0.217        
cufflinks 0.258        
cufflinks 0.04     Low Low
cufflinks 0.725       High
cufflinks 0.02     Low Low
cufflinks 0.202        
cufflinks 0.237        
cufflinks 0.161        

0 Strain