Gene : Medtr1g083500 M. truncatula Mt4.0v1
Defline:  (1 of 140) 3.1.1.11 - Pectinesterase / Pectin methylesterase Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  4561 Name:  ? Medtr1g083500
Secondary Identifier:  ? PAC:31098127
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083500 0.5kb upstream 0.5kb upstream 2362 true chr1: 37157650-37160011 Medicago truncatula
Medtr1g083500 0.5kb upstream 0.5kb upstream 500 false chr1: 37157650-37158149 Medicago truncatula
Medtr1g083500 0.5kb downstream 0.5kb downstream 2362 true chr1: 37158150-37160511 Medicago truncatula
Medtr1g083500 0.5kb downstream 0.5kb downstream 500 false chr1: 37160012-37160511 Medicago truncatula
Medtr1g083500 1.0kb upstream 1.0kb upstream 2862 true chr1: 37157150-37160011 Medicago truncatula
Medtr1g083500 1.0kb upstream 1.0kb upstream 1000 false chr1: 37157150-37158149 Medicago truncatula
Medtr1g083500 1.0kb downstream 1.0kb downstream 2862 true chr1: 37158150-37161011 Medicago truncatula
Medtr1g083500 1.0kb downstream 1.0kb downstream 1000 false chr1: 37160012-37161011 Medicago truncatula
Medtr1g083500 2.0kb upstream 2.0kb upstream 3862 true chr1: 37156150-37160011 Medicago truncatula
Medtr1g083500 2.0kb upstream 2.0kb upstream 2000 false chr1: 37156150-37158149 Medicago truncatula
Medtr1g083500 2.0kb downstream 2.0kb downstream 3862 true chr1: 37158150-37162011 Medicago truncatula
Medtr1g083500 2.0kb downstream 2.0kb downstream 2000 false chr1: 37160012-37162011 Medicago truncatula
Medtr1g083500 5.0kb upstream 5.0kb upstream 6862 true chr1: 37153150-37160011 Medicago truncatula
Medtr1g083500 5.0kb upstream 5.0kb upstream 5000 false chr1: 37153150-37158149 Medicago truncatula
Medtr1g083500 5.0kb downstream 5.0kb downstream 6862 true chr1: 37158150-37165011 Medicago truncatula
Medtr1g083500 5.0kb downstream 5.0kb downstream 5000 false chr1: 37160012-37165011 Medicago truncatula
Medtr1g083500 10.0kb upstream 10.0kb upstream 11862 true chr1: 37148150-37160011 Medicago truncatula
Medtr1g083500 10.0kb upstream 10.0kb upstream 10000 false chr1: 37148150-37158149 Medicago truncatula
Medtr1g083500 10.0kb downstream 10.0kb downstream 11862 true chr1: 37158150-37170011 Medicago truncatula
Medtr1g083500 10.0kb downstream 10.0kb downstream 10000 false chr1: 37160012-37170011 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314375 5265 Fabidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain