Gene : Medtr1g083350 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Description:  translationally-controlled tumor-like protein
Genomic Order:  4547 Name:  ? Medtr1g083350
Secondary Identifier:  ? PAC:31094295
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083350 0.5kb upstream 0.5kb upstream 2197 true chr1: 37091179-37093375 Medicago truncatula
Medtr1g083350 0.5kb upstream 0.5kb upstream 500 false chr1: 37092876-37093375 Medicago truncatula
Medtr1g083350 0.5kb downstream 0.5kb downstream 2197 true chr1: 37090679-37092875 Medicago truncatula
Medtr1g083350 0.5kb downstream 0.5kb downstream 500 false chr1: 37090679-37091178 Medicago truncatula
Medtr1g083350 1.0kb upstream 1.0kb upstream 2697 true chr1: 37091179-37093875 Medicago truncatula
Medtr1g083350 1.0kb upstream 1.0kb upstream 1000 false chr1: 37092876-37093875 Medicago truncatula
Medtr1g083350 1.0kb downstream 1.0kb downstream 2697 true chr1: 37090179-37092875 Medicago truncatula
Medtr1g083350 1.0kb downstream 1.0kb downstream 1000 false chr1: 37090179-37091178 Medicago truncatula
Medtr1g083350 2.0kb upstream 2.0kb upstream 3697 true chr1: 37091179-37094875 Medicago truncatula
Medtr1g083350 2.0kb upstream 2.0kb upstream 2000 false chr1: 37092876-37094875 Medicago truncatula
Medtr1g083350 2.0kb downstream 2.0kb downstream 3697 true chr1: 37089179-37092875 Medicago truncatula
Medtr1g083350 2.0kb downstream 2.0kb downstream 2000 false chr1: 37089179-37091178 Medicago truncatula
Medtr1g083350 5.0kb upstream 5.0kb upstream 6697 true chr1: 37091179-37097875 Medicago truncatula
Medtr1g083350 5.0kb upstream 5.0kb upstream 5000 false chr1: 37092876-37097875 Medicago truncatula
Medtr1g083350 5.0kb downstream 5.0kb downstream 6697 true chr1: 37086179-37092875 Medicago truncatula
Medtr1g083350 5.0kb downstream 5.0kb downstream 5000 false chr1: 37086179-37091178 Medicago truncatula
Medtr1g083350 10.0kb upstream 10.0kb upstream 11697 true chr1: 37091179-37102875 Medicago truncatula
Medtr1g083350 10.0kb upstream 10.0kb upstream 10000 false chr1: 37092876-37102875 Medicago truncatula
Medtr1g083350 10.0kb downstream 10.0kb downstream 11697 true chr1: 37081179-37092875 Medicago truncatula
Medtr1g083350 10.0kb downstream 10.0kb downstream 10000 false chr1: 37081179-37091178 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303382 5265 Fabidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.013       High
cufflinks 0.228        
cufflinks 0.396        
cufflinks 0.623        
cufflinks 0.346        
cufflinks 1.059        
cufflinks 0.946        
cufflinks 0.226        
cufflinks 0.239        

0 Strain