Gene : Medtr1g084060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Description:  homeobox knotted-like protein
Genomic Order:  4607 Name:  ? Medtr1g084060
Secondary Identifier:  ? PAC:31093140
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g084060 0.5kb upstream 0.5kb upstream 7487 true chr1: 37488584-37496070 Medicago truncatula
Medtr1g084060 0.5kb upstream 0.5kb upstream 500 false chr1: 37495571-37496070 Medicago truncatula
Medtr1g084060 0.5kb downstream 0.5kb downstream 7487 true chr1: 37488084-37495570 Medicago truncatula
Medtr1g084060 0.5kb downstream 0.5kb downstream 500 false chr1: 37488084-37488583 Medicago truncatula
Medtr1g084060 1.0kb upstream 1.0kb upstream 7987 true chr1: 37488584-37496570 Medicago truncatula
Medtr1g084060 1.0kb upstream 1.0kb upstream 1000 false chr1: 37495571-37496570 Medicago truncatula
Medtr1g084060 1.0kb downstream 1.0kb downstream 7987 true chr1: 37487584-37495570 Medicago truncatula
Medtr1g084060 1.0kb downstream 1.0kb downstream 1000 false chr1: 37487584-37488583 Medicago truncatula
Medtr1g084060 2.0kb upstream 2.0kb upstream 8987 true chr1: 37488584-37497570 Medicago truncatula
Medtr1g084060 2.0kb upstream 2.0kb upstream 2000 false chr1: 37495571-37497570 Medicago truncatula
Medtr1g084060 2.0kb downstream 2.0kb downstream 8987 true chr1: 37486584-37495570 Medicago truncatula
Medtr1g084060 2.0kb downstream 2.0kb downstream 2000 false chr1: 37486584-37488583 Medicago truncatula
Medtr1g084060 5.0kb upstream 5.0kb upstream 11987 true chr1: 37488584-37500570 Medicago truncatula
Medtr1g084060 5.0kb upstream 5.0kb upstream 5000 false chr1: 37495571-37500570 Medicago truncatula
Medtr1g084060 5.0kb downstream 5.0kb downstream 11987 true chr1: 37483584-37495570 Medicago truncatula
Medtr1g084060 5.0kb downstream 5.0kb downstream 5000 false chr1: 37483584-37488583 Medicago truncatula
Medtr1g084060 10.0kb upstream 10.0kb upstream 16987 true chr1: 37488584-37505570 Medicago truncatula
Medtr1g084060 10.0kb upstream 10.0kb upstream 10000 false chr1: 37495571-37505570 Medicago truncatula
Medtr1g084060 10.0kb downstream 10.0kb downstream 16987 true chr1: 37478584-37495570 Medicago truncatula
Medtr1g084060 10.0kb downstream 10.0kb downstream 10000 false chr1: 37478584-37488583 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302839 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.058     Low  
cufflinks 0.105        
cufflinks 0.099        
cufflinks 0.049     Low  
cufflinks 0.102     Low  
cufflinks 0.111        
cufflinks 0.091        
cufflinks 0.117        

0 Strain