Gene : Medtr1g083860 M. truncatula Mt4.0v1
Defline:  (1 of 11) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Description:  DUF1645 family protein
Genomic Order:  4586 Name:  ? Medtr1g083860
Secondary Identifier:  ? PAC:31097719
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083860 0.5kb upstream 0.5kb upstream 3118 true chr1: 37351530-37354647 Medicago truncatula
Medtr1g083860 0.5kb upstream 0.5kb upstream 500 false chr1: 37351530-37352029 Medicago truncatula
Medtr1g083860 0.5kb downstream 0.5kb downstream 3118 true chr1: 37352030-37355147 Medicago truncatula
Medtr1g083860 0.5kb downstream 0.5kb downstream 500 false chr1: 37354648-37355147 Medicago truncatula
Medtr1g083860 1.0kb upstream 1.0kb upstream 3618 true chr1: 37351030-37354647 Medicago truncatula
Medtr1g083860 1.0kb upstream 1.0kb upstream 1000 false chr1: 37351030-37352029 Medicago truncatula
Medtr1g083860 1.0kb downstream 1.0kb downstream 3618 true chr1: 37352030-37355647 Medicago truncatula
Medtr1g083860 1.0kb downstream 1.0kb downstream 1000 false chr1: 37354648-37355647 Medicago truncatula
Medtr1g083860 2.0kb upstream 2.0kb upstream 4618 true chr1: 37350030-37354647 Medicago truncatula
Medtr1g083860 2.0kb upstream 2.0kb upstream 2000 false chr1: 37350030-37352029 Medicago truncatula
Medtr1g083860 2.0kb downstream 2.0kb downstream 4618 true chr1: 37352030-37356647 Medicago truncatula
Medtr1g083860 2.0kb downstream 2.0kb downstream 2000 false chr1: 37354648-37356647 Medicago truncatula
Medtr1g083860 5.0kb upstream 5.0kb upstream 7618 true chr1: 37347030-37354647 Medicago truncatula
Medtr1g083860 5.0kb upstream 5.0kb upstream 5000 false chr1: 37347030-37352029 Medicago truncatula
Medtr1g083860 5.0kb downstream 5.0kb downstream 7618 true chr1: 37352030-37359647 Medicago truncatula
Medtr1g083860 5.0kb downstream 5.0kb downstream 5000 false chr1: 37354648-37359647 Medicago truncatula
Medtr1g083860 10.0kb upstream 10.0kb upstream 12618 true chr1: 37342030-37354647 Medicago truncatula
Medtr1g083860 10.0kb upstream 10.0kb upstream 10000 false chr1: 37342030-37352029 Medicago truncatula
Medtr1g083860 10.0kb downstream 10.0kb downstream 12618 true chr1: 37352030-37364647 Medicago truncatula
Medtr1g083860 10.0kb downstream 10.0kb downstream 10000 false chr1: 37354648-37364647 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301886 5265 Fabidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.396       Low
cufflinks 10.103     High High
cufflinks 6.047        
cufflinks 0.955        
cufflinks 12.799     High High
cufflinks 0.387       Low
cufflinks 1.939        
cufflinks 7.107        
cufflinks 2.281        

0 Strain