Gene : Medtr1g083690 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF276 - PROTEIN PHOSPHATASE 2C Description:  catalytic/protein phosphatase type 2C
Genomic Order:  4572 Name:  ? Medtr1g083690
Secondary Identifier:  ? PAC:31097866
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083690 0.5kb upstream 0.5kb upstream 4320 true chr1: 37239446-37243765 Medicago truncatula
Medtr1g083690 0.5kb upstream 0.5kb upstream 500 false chr1: 37239446-37239945 Medicago truncatula
Medtr1g083690 0.5kb downstream 0.5kb downstream 4320 true chr1: 37239946-37244265 Medicago truncatula
Medtr1g083690 0.5kb downstream 0.5kb downstream 500 false chr1: 37243766-37244265 Medicago truncatula
Medtr1g083690 1.0kb upstream 1.0kb upstream 4820 true chr1: 37238946-37243765 Medicago truncatula
Medtr1g083690 1.0kb upstream 1.0kb upstream 1000 false chr1: 37238946-37239945 Medicago truncatula
Medtr1g083690 1.0kb downstream 1.0kb downstream 4820 true chr1: 37239946-37244765 Medicago truncatula
Medtr1g083690 1.0kb downstream 1.0kb downstream 1000 false chr1: 37243766-37244765 Medicago truncatula
Medtr1g083690 2.0kb upstream 2.0kb upstream 5820 true chr1: 37237946-37243765 Medicago truncatula
Medtr1g083690 2.0kb upstream 2.0kb upstream 2000 false chr1: 37237946-37239945 Medicago truncatula
Medtr1g083690 2.0kb downstream 2.0kb downstream 5820 true chr1: 37239946-37245765 Medicago truncatula
Medtr1g083690 2.0kb downstream 2.0kb downstream 2000 false chr1: 37243766-37245765 Medicago truncatula
Medtr1g083690 5.0kb upstream 5.0kb upstream 8820 true chr1: 37234946-37243765 Medicago truncatula
Medtr1g083690 5.0kb upstream 5.0kb upstream 5000 false chr1: 37234946-37239945 Medicago truncatula
Medtr1g083690 5.0kb downstream 5.0kb downstream 8820 true chr1: 37239946-37248765 Medicago truncatula
Medtr1g083690 5.0kb downstream 5.0kb downstream 5000 false chr1: 37243766-37248765 Medicago truncatula
Medtr1g083690 10.0kb upstream 10.0kb upstream 13820 true chr1: 37229946-37243765 Medicago truncatula
Medtr1g083690 10.0kb upstream 10.0kb upstream 10000 false chr1: 37229946-37239945 Medicago truncatula
Medtr1g083690 10.0kb downstream 10.0kb downstream 13820 true chr1: 37239946-37253765 Medicago truncatula
Medtr1g083690 10.0kb downstream 10.0kb downstream 10000 false chr1: 37243766-37253765 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309783 5265 Fabidae View MSA
124065927 5270 Rosid View MSA
123753048 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723        
cufflinks 2.238        
cufflinks 2.292        
cufflinks 0.049     Low Low
cufflinks 3.288        
cufflinks 0.029     Low Low
cufflinks 0.363        
cufflinks 1.838        
cufflinks 1.387        

0 Strain