Gene : Medtr1g084670 M. truncatula Mt4.0v1
Defline:  (1 of 6) 2.4.1.123 - Inositol 3-alpha-galactosyltransferase / UDP-alpha-D-galactose:myo-inositol 3-alpha-D-galactosyltransferase Description:  galactinol synthase
Genomic Order:  4630 Name:  ? Medtr1g084670
Secondary Identifier:  ? PAC:31098737
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5337 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g084670 0.5kb upstream 0.5kb upstream 2358 true chr1: 37696806-37699163 Medicago truncatula
Medtr1g084670 0.5kb upstream 0.5kb upstream 500 false chr1: 37696806-37697305 Medicago truncatula
Medtr1g084670 0.5kb downstream 0.5kb downstream 2358 true chr1: 37697306-37699663 Medicago truncatula
Medtr1g084670 0.5kb downstream 0.5kb downstream 500 false chr1: 37699164-37699663 Medicago truncatula
Medtr1g084670 1.0kb upstream 1.0kb upstream 2858 true chr1: 37696306-37699163 Medicago truncatula
Medtr1g084670 1.0kb upstream 1.0kb upstream 1000 false chr1: 37696306-37697305 Medicago truncatula
Medtr1g084670 1.0kb downstream 1.0kb downstream 2858 true chr1: 37697306-37700163 Medicago truncatula
Medtr1g084670 1.0kb downstream 1.0kb downstream 1000 false chr1: 37699164-37700163 Medicago truncatula
Medtr1g084670 2.0kb upstream 2.0kb upstream 3858 true chr1: 37695306-37699163 Medicago truncatula
Medtr1g084670 2.0kb upstream 2.0kb upstream 2000 false chr1: 37695306-37697305 Medicago truncatula
Medtr1g084670 2.0kb downstream 2.0kb downstream 3858 true chr1: 37697306-37701163 Medicago truncatula
Medtr1g084670 2.0kb downstream 2.0kb downstream 2000 false chr1: 37699164-37701163 Medicago truncatula
Medtr1g084670 5.0kb upstream 5.0kb upstream 6858 true chr1: 37692306-37699163 Medicago truncatula
Medtr1g084670 5.0kb upstream 5.0kb upstream 5000 false chr1: 37692306-37697305 Medicago truncatula
Medtr1g084670 5.0kb downstream 5.0kb downstream 6858 true chr1: 37697306-37704163 Medicago truncatula
Medtr1g084670 5.0kb downstream 5.0kb downstream 5000 false chr1: 37699164-37704163 Medicago truncatula
Medtr1g084670 10.0kb upstream 10.0kb upstream 11858 true chr1: 37687306-37699163 Medicago truncatula
Medtr1g084670 10.0kb upstream 10.0kb upstream 10000 false chr1: 37687306-37697305 Medicago truncatula
Medtr1g084670 10.0kb downstream 10.0kb downstream 11858 true chr1: 37697306-37709163 Medicago truncatula
Medtr1g084670 10.0kb downstream 10.0kb downstream 10000 false chr1: 37699164-37709163 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303680 5265 Fabidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386        
cufflinks 0.04     Low  
cufflinks 0.03     Low  
cufflinks 0.353        
cufflinks 0.077        
cufflinks 0.444        
cufflinks 1.829       High
cufflinks 0.012     Low Low
cufflinks 1.889       High

0 Strain