Gene : Medtr1g084750 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR16465 - NUCLEASE-RELATED Description:  U1 zinc finger protein
Genomic Order:  4634 Name:  ? Medtr1g084750
Secondary Identifier:  ? PAC:31099702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g084750 0.5kb upstream 0.5kb upstream 2154 true chr1: 37726250-37728403 Medicago truncatula
Medtr1g084750 0.5kb upstream 0.5kb upstream 500 false chr1: 37727904-37728403 Medicago truncatula
Medtr1g084750 0.5kb downstream 0.5kb downstream 2154 true chr1: 37725750-37727903 Medicago truncatula
Medtr1g084750 0.5kb downstream 0.5kb downstream 500 false chr1: 37725750-37726249 Medicago truncatula
Medtr1g084750 1.0kb upstream 1.0kb upstream 2654 true chr1: 37726250-37728903 Medicago truncatula
Medtr1g084750 1.0kb upstream 1.0kb upstream 1000 false chr1: 37727904-37728903 Medicago truncatula
Medtr1g084750 1.0kb downstream 1.0kb downstream 2654 true chr1: 37725250-37727903 Medicago truncatula
Medtr1g084750 1.0kb downstream 1.0kb downstream 1000 false chr1: 37725250-37726249 Medicago truncatula
Medtr1g084750 2.0kb upstream 2.0kb upstream 3654 true chr1: 37726250-37729903 Medicago truncatula
Medtr1g084750 2.0kb upstream 2.0kb upstream 2000 false chr1: 37727904-37729903 Medicago truncatula
Medtr1g084750 2.0kb downstream 2.0kb downstream 3654 true chr1: 37724250-37727903 Medicago truncatula
Medtr1g084750 2.0kb downstream 2.0kb downstream 2000 false chr1: 37724250-37726249 Medicago truncatula
Medtr1g084750 5.0kb upstream 5.0kb upstream 6654 true chr1: 37726250-37732903 Medicago truncatula
Medtr1g084750 5.0kb upstream 5.0kb upstream 5000 false chr1: 37727904-37732903 Medicago truncatula
Medtr1g084750 5.0kb downstream 5.0kb downstream 6654 true chr1: 37721250-37727903 Medicago truncatula
Medtr1g084750 5.0kb downstream 5.0kb downstream 5000 false chr1: 37721250-37726249 Medicago truncatula
Medtr1g084750 10.0kb upstream 10.0kb upstream 11654 true chr1: 37726250-37737903 Medicago truncatula
Medtr1g084750 10.0kb upstream 10.0kb upstream 10000 false chr1: 37727904-37737903 Medicago truncatula
Medtr1g084750 10.0kb downstream 10.0kb downstream 11654 true chr1: 37716250-37727903 Medicago truncatula
Medtr1g084750 10.0kb downstream 10.0kb downstream 10000 false chr1: 37716250-37726249 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299792 5265 Fabidae View MSA
124062249 5270 Rosid View MSA
123737292 5271 Pentapetalae View MSA
122790425 5272 Eudicot View MSA
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.499        
cufflinks 3.38       Low
cufflinks 5.197        
cufflinks 12.017     High High
cufflinks 3.762        
cufflinks 19.87     High High
cufflinks 6.759        
cufflinks 3.434       Low
cufflinks 8.315        

0 Strain