Gene : Medtr1g085460 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31867:SF34 - EXPANSIN-A17-RELATED Description:  expansin-A1-like protein
Genomic Order:  4694 Name:  ? Medtr1g085460
Secondary Identifier:  ? PAC:31096894
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g085460 0.5kb upstream 0.5kb upstream 1864 true chr1: 38164272-38166135 Medicago truncatula
Medtr1g085460 0.5kb upstream 0.5kb upstream 500 false chr1: 38164272-38164771 Medicago truncatula
Medtr1g085460 0.5kb downstream 0.5kb downstream 1864 true chr1: 38164772-38166635 Medicago truncatula
Medtr1g085460 0.5kb downstream 0.5kb downstream 500 false chr1: 38166136-38166635 Medicago truncatula
Medtr1g085460 1.0kb upstream 1.0kb upstream 2364 true chr1: 38163772-38166135 Medicago truncatula
Medtr1g085460 1.0kb upstream 1.0kb upstream 1000 false chr1: 38163772-38164771 Medicago truncatula
Medtr1g085460 1.0kb downstream 1.0kb downstream 2364 true chr1: 38164772-38167135 Medicago truncatula
Medtr1g085460 1.0kb downstream 1.0kb downstream 1000 false chr1: 38166136-38167135 Medicago truncatula
Medtr1g085460 2.0kb upstream 2.0kb upstream 3364 true chr1: 38162772-38166135 Medicago truncatula
Medtr1g085460 2.0kb upstream 2.0kb upstream 2000 false chr1: 38162772-38164771 Medicago truncatula
Medtr1g085460 2.0kb downstream 2.0kb downstream 3364 true chr1: 38164772-38168135 Medicago truncatula
Medtr1g085460 2.0kb downstream 2.0kb downstream 2000 false chr1: 38166136-38168135 Medicago truncatula
Medtr1g085460 5.0kb upstream 5.0kb upstream 6364 true chr1: 38159772-38166135 Medicago truncatula
Medtr1g085460 5.0kb upstream 5.0kb upstream 5000 false chr1: 38159772-38164771 Medicago truncatula
Medtr1g085460 5.0kb downstream 5.0kb downstream 6364 true chr1: 38164772-38171135 Medicago truncatula
Medtr1g085460 5.0kb downstream 5.0kb downstream 5000 false chr1: 38166136-38171135 Medicago truncatula
Medtr1g085460 10.0kb upstream 10.0kb upstream 11364 true chr1: 38154772-38166135 Medicago truncatula
Medtr1g085460 10.0kb upstream 10.0kb upstream 10000 false chr1: 38154772-38164771 Medicago truncatula
Medtr1g085460 10.0kb downstream 10.0kb downstream 11364 true chr1: 38164772-38176135 Medicago truncatula
Medtr1g085460 10.0kb downstream 10.0kb downstream 10000 false chr1: 38166136-38176135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026644 5273 Angiosperm View MSA
122296436 5265 Fabidae View MSA
124060706 5270 Rosid View MSA
123647556 5271 Pentapetalae View MSA
122790037 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121296447 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.63        
cufflinks 0.017     Low Low
cufflinks 0.011     Low Low
cufflinks 2.974        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.248        
cufflinks 3.8        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.706        

0 Strain