Gene : Medtr1g085440 M. truncatula Mt4.0v1
Description:  knotted 1-binding protein Genomic Order:  4692
Name:  ? Medtr1g085440 Secondary Identifier:  ? PAC:31092791
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g085440 0.5kb upstream 0.5kb upstream 1224 true chr1: 38159733-38160956 Medicago truncatula
Medtr1g085440 0.5kb upstream 0.5kb upstream 500 false chr1: 38159733-38160232 Medicago truncatula
Medtr1g085440 0.5kb downstream 0.5kb downstream 1224 true chr1: 38160233-38161456 Medicago truncatula
Medtr1g085440 0.5kb downstream 0.5kb downstream 500 false chr1: 38160957-38161456 Medicago truncatula
Medtr1g085440 1.0kb upstream 1.0kb upstream 1724 true chr1: 38159233-38160956 Medicago truncatula
Medtr1g085440 1.0kb upstream 1.0kb upstream 1000 false chr1: 38159233-38160232 Medicago truncatula
Medtr1g085440 1.0kb downstream 1.0kb downstream 1724 true chr1: 38160233-38161956 Medicago truncatula
Medtr1g085440 1.0kb downstream 1.0kb downstream 1000 false chr1: 38160957-38161956 Medicago truncatula
Medtr1g085440 2.0kb upstream 2.0kb upstream 2724 true chr1: 38158233-38160956 Medicago truncatula
Medtr1g085440 2.0kb upstream 2.0kb upstream 2000 false chr1: 38158233-38160232 Medicago truncatula
Medtr1g085440 2.0kb downstream 2.0kb downstream 2724 true chr1: 38160233-38162956 Medicago truncatula
Medtr1g085440 2.0kb downstream 2.0kb downstream 2000 false chr1: 38160957-38162956 Medicago truncatula
Medtr1g085440 5.0kb upstream 5.0kb upstream 5724 true chr1: 38155233-38160956 Medicago truncatula
Medtr1g085440 5.0kb upstream 5.0kb upstream 5000 false chr1: 38155233-38160232 Medicago truncatula
Medtr1g085440 5.0kb downstream 5.0kb downstream 5724 true chr1: 38160233-38165956 Medicago truncatula
Medtr1g085440 5.0kb downstream 5.0kb downstream 5000 false chr1: 38160957-38165956 Medicago truncatula
Medtr1g085440 10.0kb upstream 10.0kb upstream 10724 true chr1: 38150233-38160956 Medicago truncatula
Medtr1g085440 10.0kb upstream 10.0kb upstream 10000 false chr1: 38150233-38160232 Medicago truncatula
Medtr1g085440 10.0kb downstream 10.0kb downstream 10724 true chr1: 38160233-38170956 Medicago truncatula
Medtr1g085440 10.0kb downstream 10.0kb downstream 10000 false chr1: 38160957-38170956 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304786 5265 Fabidae View MSA
124065710 5270 Rosid View MSA
123740158 5271 Pentapetalae View MSA
122793666 5272 Eudicot View MSA
122047325 5273 Angiosperm View MSA
121347888 5274 Embryophyte View MSA
123380666 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073        
cufflinks 0.05     Low  

0 Strain