Gene : Medtr1g085050 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Description:  like-Sm protein
Genomic Order:  4663 Name:  ? Medtr1g085050
Secondary Identifier:  ? PAC:31093344
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g085050 0.5kb upstream 0.5kb upstream 1188 true chr1: 37967204-37968391 Medicago truncatula
Medtr1g085050 0.5kb upstream 0.5kb upstream 500 false chr1: 37967204-37967703 Medicago truncatula
Medtr1g085050 0.5kb downstream 0.5kb downstream 1188 true chr1: 37967704-37968891 Medicago truncatula
Medtr1g085050 0.5kb downstream 0.5kb downstream 500 false chr1: 37968392-37968891 Medicago truncatula
Medtr1g085050 1.0kb upstream 1.0kb upstream 1688 true chr1: 37966704-37968391 Medicago truncatula
Medtr1g085050 1.0kb upstream 1.0kb upstream 1000 false chr1: 37966704-37967703 Medicago truncatula
Medtr1g085050 1.0kb downstream 1.0kb downstream 1688 true chr1: 37967704-37969391 Medicago truncatula
Medtr1g085050 1.0kb downstream 1.0kb downstream 1000 false chr1: 37968392-37969391 Medicago truncatula
Medtr1g085050 2.0kb upstream 2.0kb upstream 2688 true chr1: 37965704-37968391 Medicago truncatula
Medtr1g085050 2.0kb upstream 2.0kb upstream 2000 false chr1: 37965704-37967703 Medicago truncatula
Medtr1g085050 2.0kb downstream 2.0kb downstream 2688 true chr1: 37967704-37970391 Medicago truncatula
Medtr1g085050 2.0kb downstream 2.0kb downstream 2000 false chr1: 37968392-37970391 Medicago truncatula
Medtr1g085050 5.0kb upstream 5.0kb upstream 5688 true chr1: 37962704-37968391 Medicago truncatula
Medtr1g085050 5.0kb upstream 5.0kb upstream 5000 false chr1: 37962704-37967703 Medicago truncatula
Medtr1g085050 5.0kb downstream 5.0kb downstream 5688 true chr1: 37967704-37973391 Medicago truncatula
Medtr1g085050 5.0kb downstream 5.0kb downstream 5000 false chr1: 37968392-37973391 Medicago truncatula
Medtr1g085050 10.0kb upstream 10.0kb upstream 10688 true chr1: 37957704-37968391 Medicago truncatula
Medtr1g085050 10.0kb upstream 10.0kb upstream 10000 false chr1: 37957704-37967703 Medicago truncatula
Medtr1g085050 10.0kb downstream 10.0kb downstream 10688 true chr1: 37967704-37978391 Medicago truncatula
Medtr1g085050 10.0kb downstream 10.0kb downstream 10000 false chr1: 37968392-37978391 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309330 5265 Fabidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain