Gene : Medtr1g086080 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR24221:SF205 - ABC TRANSPORTER B FAMILY MEMBER 11-RELATED Description:  ABC transporter B family protein
Genomic Order:  4732 Name:  ? Medtr1g086080
Secondary Identifier:  ? PAC:31093227
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g086080 0.5kb upstream 0.5kb upstream 7515 true chr1: 38521884-38529398 Medicago truncatula
Medtr1g086080 0.5kb upstream 0.5kb upstream 500 false chr1: 38528899-38529398 Medicago truncatula
Medtr1g086080 0.5kb downstream 0.5kb downstream 7515 true chr1: 38521384-38528898 Medicago truncatula
Medtr1g086080 0.5kb downstream 0.5kb downstream 500 false chr1: 38521384-38521883 Medicago truncatula
Medtr1g086080 1.0kb upstream 1.0kb upstream 8015 true chr1: 38521884-38529898 Medicago truncatula
Medtr1g086080 1.0kb upstream 1.0kb upstream 1000 false chr1: 38528899-38529898 Medicago truncatula
Medtr1g086080 1.0kb downstream 1.0kb downstream 8015 true chr1: 38520884-38528898 Medicago truncatula
Medtr1g086080 1.0kb downstream 1.0kb downstream 1000 false chr1: 38520884-38521883 Medicago truncatula
Medtr1g086080 2.0kb upstream 2.0kb upstream 9015 true chr1: 38521884-38530898 Medicago truncatula
Medtr1g086080 2.0kb upstream 2.0kb upstream 2000 false chr1: 38528899-38530898 Medicago truncatula
Medtr1g086080 2.0kb downstream 2.0kb downstream 9015 true chr1: 38519884-38528898 Medicago truncatula
Medtr1g086080 2.0kb downstream 2.0kb downstream 2000 false chr1: 38519884-38521883 Medicago truncatula
Medtr1g086080 5.0kb upstream 5.0kb upstream 12015 true chr1: 38521884-38533898 Medicago truncatula
Medtr1g086080 5.0kb upstream 5.0kb upstream 5000 false chr1: 38528899-38533898 Medicago truncatula
Medtr1g086080 5.0kb downstream 5.0kb downstream 12015 true chr1: 38516884-38528898 Medicago truncatula
Medtr1g086080 5.0kb downstream 5.0kb downstream 5000 false chr1: 38516884-38521883 Medicago truncatula
Medtr1g086080 10.0kb upstream 10.0kb upstream 17015 true chr1: 38521884-38538898 Medicago truncatula
Medtr1g086080 10.0kb upstream 10.0kb upstream 10000 false chr1: 38528899-38538898 Medicago truncatula
Medtr1g086080 10.0kb downstream 10.0kb downstream 17015 true chr1: 38511884-38528898 Medicago truncatula
Medtr1g086080 10.0kb downstream 10.0kb downstream 10000 false chr1: 38511884-38521883 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300953 5265 Fabidae View MSA
124074753 5270 Rosid View MSA
123748149 5271 Pentapetalae View MSA
122791431 5272 Eudicot View MSA
122049071 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350158 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.554     High  
cufflinks 5.806        
cufflinks 4.52        
cufflinks 11.829     High  
cufflinks 4.664        
cufflinks 8.279        
cufflinks 36.027     High High
cufflinks 4.062       Low
cufflinks 20.18     High High

0 Strain