Gene : Medtr1g085750 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31734:SF15 - AUXIN-RESPONSIVE PROTEIN IAA20-RELATED Description:  auxin-responsive AUX/IAA family protein
Genomic Order:  4719 Name:  ? Medtr1g085750
Secondary Identifier:  ? PAC:31100630
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g085750 0.5kb upstream 0.5kb upstream 1871 true chr1: 38332847-38334717 Medicago truncatula
Medtr1g085750 0.5kb upstream 0.5kb upstream 500 false chr1: 38332847-38333346 Medicago truncatula
Medtr1g085750 0.5kb downstream 0.5kb downstream 1871 true chr1: 38333347-38335217 Medicago truncatula
Medtr1g085750 0.5kb downstream 0.5kb downstream 500 false chr1: 38334718-38335217 Medicago truncatula
Medtr1g085750 1.0kb upstream 1.0kb upstream 2371 true chr1: 38332347-38334717 Medicago truncatula
Medtr1g085750 1.0kb upstream 1.0kb upstream 1000 false chr1: 38332347-38333346 Medicago truncatula
Medtr1g085750 1.0kb downstream 1.0kb downstream 2371 true chr1: 38333347-38335717 Medicago truncatula
Medtr1g085750 1.0kb downstream 1.0kb downstream 1000 false chr1: 38334718-38335717 Medicago truncatula
Medtr1g085750 2.0kb upstream 2.0kb upstream 3371 true chr1: 38331347-38334717 Medicago truncatula
Medtr1g085750 2.0kb upstream 2.0kb upstream 2000 false chr1: 38331347-38333346 Medicago truncatula
Medtr1g085750 2.0kb downstream 2.0kb downstream 3371 true chr1: 38333347-38336717 Medicago truncatula
Medtr1g085750 2.0kb downstream 2.0kb downstream 2000 false chr1: 38334718-38336717 Medicago truncatula
Medtr1g085750 5.0kb upstream 5.0kb upstream 6371 true chr1: 38328347-38334717 Medicago truncatula
Medtr1g085750 5.0kb upstream 5.0kb upstream 5000 false chr1: 38328347-38333346 Medicago truncatula
Medtr1g085750 5.0kb downstream 5.0kb downstream 6371 true chr1: 38333347-38339717 Medicago truncatula
Medtr1g085750 5.0kb downstream 5.0kb downstream 5000 false chr1: 38334718-38339717 Medicago truncatula
Medtr1g085750 10.0kb upstream 10.0kb upstream 11371 true chr1: 38323347-38334717 Medicago truncatula
Medtr1g085750 10.0kb upstream 10.0kb upstream 10000 false chr1: 38323347-38333346 Medicago truncatula
Medtr1g085750 10.0kb downstream 10.0kb downstream 11371 true chr1: 38333347-38344717 Medicago truncatula
Medtr1g085750 10.0kb downstream 10.0kb downstream 10000 false chr1: 38334718-38344717 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297026 5265 Fabidae View MSA
124071177 5270 Rosid View MSA
123752177 5271 Pentapetalae View MSA
122794866 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.226       High
cufflinks 0.328        
cufflinks 0.307       Low
cufflinks 1.778        
cufflinks 0.409        
cufflinks 1.754        
cufflinks 4.015       High
cufflinks 0.255       Low
cufflinks 1.877        

0 Strain