Gene : Medtr1g064540 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12713 - VACUOLAR ATP SYNTHASE SUBUNIT G Description:  vacuolar (H+)-ATPase G subunit
Genomic Order:  3418 Name:  ? Medtr1g064540
Secondary Identifier:  ? PAC:31100454
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g064540 0.5kb upstream 0.5kb upstream 3590 true chr1: 28387410-28390999 Medicago truncatula
Medtr1g064540 0.5kb upstream 0.5kb upstream 500 false chr1: 28387410-28387909 Medicago truncatula
Medtr1g064540 0.5kb downstream 0.5kb downstream 3590 true chr1: 28387910-28391499 Medicago truncatula
Medtr1g064540 0.5kb downstream 0.5kb downstream 500 false chr1: 28391000-28391499 Medicago truncatula
Medtr1g064540 1.0kb upstream 1.0kb upstream 4090 true chr1: 28386910-28390999 Medicago truncatula
Medtr1g064540 1.0kb upstream 1.0kb upstream 1000 false chr1: 28386910-28387909 Medicago truncatula
Medtr1g064540 1.0kb downstream 1.0kb downstream 4090 true chr1: 28387910-28391999 Medicago truncatula
Medtr1g064540 1.0kb downstream 1.0kb downstream 1000 false chr1: 28391000-28391999 Medicago truncatula
Medtr1g064540 2.0kb upstream 2.0kb upstream 5090 true chr1: 28385910-28390999 Medicago truncatula
Medtr1g064540 2.0kb upstream 2.0kb upstream 2000 false chr1: 28385910-28387909 Medicago truncatula
Medtr1g064540 2.0kb downstream 2.0kb downstream 5090 true chr1: 28387910-28392999 Medicago truncatula
Medtr1g064540 2.0kb downstream 2.0kb downstream 2000 false chr1: 28391000-28392999 Medicago truncatula
Medtr1g064540 5.0kb upstream 5.0kb upstream 8090 true chr1: 28382910-28390999 Medicago truncatula
Medtr1g064540 5.0kb upstream 5.0kb upstream 5000 false chr1: 28382910-28387909 Medicago truncatula
Medtr1g064540 5.0kb downstream 5.0kb downstream 8090 true chr1: 28387910-28395999 Medicago truncatula
Medtr1g064540 5.0kb downstream 5.0kb downstream 5000 false chr1: 28391000-28395999 Medicago truncatula
Medtr1g064540 10.0kb upstream 10.0kb upstream 13090 true chr1: 28377910-28390999 Medicago truncatula
Medtr1g064540 10.0kb upstream 10.0kb upstream 10000 false chr1: 28377910-28387909 Medicago truncatula
Medtr1g064540 10.0kb downstream 10.0kb downstream 13090 true chr1: 28387910-28400999 Medicago truncatula
Medtr1g064540 10.0kb downstream 10.0kb downstream 10000 false chr1: 28391000-28400999 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122310150 5265 Fabidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.787       Low
cufflinks 4.857        
cufflinks 4.631        
cufflinks 7.016       High
cufflinks 5.061        
cufflinks 3.562        
cufflinks 6.149        
cufflinks 3.961        
cufflinks 7.856       High

0 Strain