Gene : Medtr1g064090 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR10362 - HISTIDINE AMMONIA-LYASE Description:  phenylalanine ammonia-lyase-like protein
Genomic Order:  3391 Name:  ? Medtr1g064090
Secondary Identifier:  ? PAC:31094117
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY1F-467 Medicago truncatula pathologic  
Mtruncatula PWY-7186 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g064090 0.5kb upstream 0.5kb upstream 5199 true chr1: 28183314-28188512 Medicago truncatula
Medtr1g064090 0.5kb upstream 0.5kb upstream 500 false chr1: 28188013-28188512 Medicago truncatula
Medtr1g064090 0.5kb downstream 0.5kb downstream 5199 true chr1: 28182814-28188012 Medicago truncatula
Medtr1g064090 0.5kb downstream 0.5kb downstream 500 false chr1: 28182814-28183313 Medicago truncatula
Medtr1g064090 1.0kb upstream 1.0kb upstream 5699 true chr1: 28183314-28189012 Medicago truncatula
Medtr1g064090 1.0kb upstream 1.0kb upstream 1000 false chr1: 28188013-28189012 Medicago truncatula
Medtr1g064090 1.0kb downstream 1.0kb downstream 5699 true chr1: 28182314-28188012 Medicago truncatula
Medtr1g064090 1.0kb downstream 1.0kb downstream 1000 false chr1: 28182314-28183313 Medicago truncatula
Medtr1g064090 2.0kb upstream 2.0kb upstream 6699 true chr1: 28183314-28190012 Medicago truncatula
Medtr1g064090 2.0kb upstream 2.0kb upstream 2000 false chr1: 28188013-28190012 Medicago truncatula
Medtr1g064090 2.0kb downstream 2.0kb downstream 6699 true chr1: 28181314-28188012 Medicago truncatula
Medtr1g064090 2.0kb downstream 2.0kb downstream 2000 false chr1: 28181314-28183313 Medicago truncatula
Medtr1g064090 5.0kb upstream 5.0kb upstream 9699 true chr1: 28183314-28193012 Medicago truncatula
Medtr1g064090 5.0kb upstream 5.0kb upstream 5000 false chr1: 28188013-28193012 Medicago truncatula
Medtr1g064090 5.0kb downstream 5.0kb downstream 9699 true chr1: 28178314-28188012 Medicago truncatula
Medtr1g064090 5.0kb downstream 5.0kb downstream 5000 false chr1: 28178314-28183313 Medicago truncatula
Medtr1g064090 10.0kb upstream 10.0kb upstream 14699 true chr1: 28183314-28198012 Medicago truncatula
Medtr1g064090 10.0kb upstream 10.0kb upstream 10000 false chr1: 28188013-28198012 Medicago truncatula
Medtr1g064090 10.0kb downstream 10.0kb downstream 14699 true chr1: 28173314-28188012 Medicago truncatula
Medtr1g064090 10.0kb downstream 10.0kb downstream 10000 false chr1: 28173314-28183313 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.19     High  
cufflinks 50.843     High  
cufflinks 14.26     High Low
cufflinks 103.96     High  
cufflinks 38.444     High  
cufflinks 70.714     High  
cufflinks 150.259     High High
cufflinks 28.381     High  
cufflinks 108.752     High  

0 Strain