Gene : Medtr1g067040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11 Description:  SPO11/DNA topoisomerase VI, subunit A
Genomic Order:  3476 Name:  ? Medtr1g067040
Secondary Identifier:  ? PAC:31099513
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g067040 0.5kb upstream 0.5kb upstream 3578 true chr1: 28846880-28850457 Medicago truncatula
Medtr1g067040 0.5kb upstream 0.5kb upstream 500 false chr1: 28849958-28850457 Medicago truncatula
Medtr1g067040 0.5kb downstream 0.5kb downstream 3578 true chr1: 28846380-28849957 Medicago truncatula
Medtr1g067040 0.5kb downstream 0.5kb downstream 500 false chr1: 28846380-28846879 Medicago truncatula
Medtr1g067040 1.0kb upstream 1.0kb upstream 4078 true chr1: 28846880-28850957 Medicago truncatula
Medtr1g067040 1.0kb upstream 1.0kb upstream 1000 false chr1: 28849958-28850957 Medicago truncatula
Medtr1g067040 1.0kb downstream 1.0kb downstream 4078 true chr1: 28845880-28849957 Medicago truncatula
Medtr1g067040 1.0kb downstream 1.0kb downstream 1000 false chr1: 28845880-28846879 Medicago truncatula
Medtr1g067040 2.0kb upstream 2.0kb upstream 5078 true chr1: 28846880-28851957 Medicago truncatula
Medtr1g067040 2.0kb upstream 2.0kb upstream 2000 false chr1: 28849958-28851957 Medicago truncatula
Medtr1g067040 2.0kb downstream 2.0kb downstream 5078 true chr1: 28844880-28849957 Medicago truncatula
Medtr1g067040 2.0kb downstream 2.0kb downstream 2000 false chr1: 28844880-28846879 Medicago truncatula
Medtr1g067040 5.0kb upstream 5.0kb upstream 8078 true chr1: 28846880-28854957 Medicago truncatula
Medtr1g067040 5.0kb upstream 5.0kb upstream 5000 false chr1: 28849958-28854957 Medicago truncatula
Medtr1g067040 5.0kb downstream 5.0kb downstream 8078 true chr1: 28841880-28849957 Medicago truncatula
Medtr1g067040 5.0kb downstream 5.0kb downstream 5000 false chr1: 28841880-28846879 Medicago truncatula
Medtr1g067040 10.0kb upstream 10.0kb upstream 13078 true chr1: 28846880-28859957 Medicago truncatula
Medtr1g067040 10.0kb upstream 10.0kb upstream 10000 false chr1: 28849958-28859957 Medicago truncatula
Medtr1g067040 10.0kb downstream 10.0kb downstream 13078 true chr1: 28836880-28849957 Medicago truncatula
Medtr1g067040 10.0kb downstream 10.0kb downstream 10000 false chr1: 28836880-28846879 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303659 5265 Fabidae View MSA
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.608        
cufflinks 2.783        
cufflinks 2.761        
cufflinks 8.148       High
cufflinks 3.22        
cufflinks 2.06       Low
cufflinks 4.26        
cufflinks 2.252        
cufflinks 9.337       High

0 Strain