Gene : Medtr1g068960 M. truncatula Mt4.0v1
Defline:  (1 of 47) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  3554 Name:  ? Medtr1g068960
Secondary Identifier:  ? PAC:31096714
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g068960 0.5kb upstream 0.5kb upstream 2869 true chr1: 29507424-29510292 Medicago truncatula
Medtr1g068960 0.5kb upstream 0.5kb upstream 500 false chr1: 29509793-29510292 Medicago truncatula
Medtr1g068960 0.5kb downstream 0.5kb downstream 2869 true chr1: 29506924-29509792 Medicago truncatula
Medtr1g068960 0.5kb downstream 0.5kb downstream 500 false chr1: 29506924-29507423 Medicago truncatula
Medtr1g068960 1.0kb upstream 1.0kb upstream 3369 true chr1: 29507424-29510792 Medicago truncatula
Medtr1g068960 1.0kb upstream 1.0kb upstream 1000 false chr1: 29509793-29510792 Medicago truncatula
Medtr1g068960 1.0kb downstream 1.0kb downstream 3369 true chr1: 29506424-29509792 Medicago truncatula
Medtr1g068960 1.0kb downstream 1.0kb downstream 1000 false chr1: 29506424-29507423 Medicago truncatula
Medtr1g068960 2.0kb upstream 2.0kb upstream 4369 true chr1: 29507424-29511792 Medicago truncatula
Medtr1g068960 2.0kb upstream 2.0kb upstream 2000 false chr1: 29509793-29511792 Medicago truncatula
Medtr1g068960 2.0kb downstream 2.0kb downstream 4369 true chr1: 29505424-29509792 Medicago truncatula
Medtr1g068960 2.0kb downstream 2.0kb downstream 2000 false chr1: 29505424-29507423 Medicago truncatula
Medtr1g068960 5.0kb upstream 5.0kb upstream 7369 true chr1: 29507424-29514792 Medicago truncatula
Medtr1g068960 5.0kb upstream 5.0kb upstream 5000 false chr1: 29509793-29514792 Medicago truncatula
Medtr1g068960 5.0kb downstream 5.0kb downstream 7369 true chr1: 29502424-29509792 Medicago truncatula
Medtr1g068960 5.0kb downstream 5.0kb downstream 5000 false chr1: 29502424-29507423 Medicago truncatula
Medtr1g068960 10.0kb upstream 10.0kb upstream 12369 true chr1: 29507424-29519792 Medicago truncatula
Medtr1g068960 10.0kb upstream 10.0kb upstream 10000 false chr1: 29509793-29519792 Medicago truncatula
Medtr1g068960 10.0kb downstream 10.0kb downstream 12369 true chr1: 29497424-29509792 Medicago truncatula
Medtr1g068960 10.0kb downstream 10.0kb downstream 10000 false chr1: 29497424-29507423 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304408 5265 Fabidae View MSA
124068324 5270 Rosid View MSA
123737648 5271 Pentapetalae View MSA
122793672 5272 Eudicot View MSA
122045784 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.898        
cufflinks 9.415        
cufflinks 9.418        
cufflinks 1.166        
cufflinks 17.895     High High
cufflinks 0.17       Low
cufflinks 1.217        
cufflinks 11.747     High  
cufflinks 0.676        

0 Strain