Gene : Medtr1g078090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22814:SF136 - HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Description:  heavy metal transport/detoxification superfamily protein
Genomic Order:  4251 Name:  ? Medtr1g078090
Secondary Identifier:  ? PAC:31099031
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g078090 0.5kb upstream 0.5kb upstream 4540 true chr1: 34942666-34947205 Medicago truncatula
Medtr1g078090 0.5kb upstream 0.5kb upstream 500 false chr1: 34942666-34943165 Medicago truncatula
Medtr1g078090 0.5kb downstream 0.5kb downstream 4540 true chr1: 34943166-34947705 Medicago truncatula
Medtr1g078090 0.5kb downstream 0.5kb downstream 500 false chr1: 34947206-34947705 Medicago truncatula
Medtr1g078090 1.0kb upstream 1.0kb upstream 5040 true chr1: 34942166-34947205 Medicago truncatula
Medtr1g078090 1.0kb upstream 1.0kb upstream 1000 false chr1: 34942166-34943165 Medicago truncatula
Medtr1g078090 1.0kb downstream 1.0kb downstream 5040 true chr1: 34943166-34948205 Medicago truncatula
Medtr1g078090 1.0kb downstream 1.0kb downstream 1000 false chr1: 34947206-34948205 Medicago truncatula
Medtr1g078090 2.0kb upstream 2.0kb upstream 6040 true chr1: 34941166-34947205 Medicago truncatula
Medtr1g078090 2.0kb upstream 2.0kb upstream 2000 false chr1: 34941166-34943165 Medicago truncatula
Medtr1g078090 2.0kb downstream 2.0kb downstream 6040 true chr1: 34943166-34949205 Medicago truncatula
Medtr1g078090 2.0kb downstream 2.0kb downstream 2000 false chr1: 34947206-34949205 Medicago truncatula
Medtr1g078090 5.0kb upstream 5.0kb upstream 9040 true chr1: 34938166-34947205 Medicago truncatula
Medtr1g078090 5.0kb upstream 5.0kb upstream 5000 false chr1: 34938166-34943165 Medicago truncatula
Medtr1g078090 5.0kb downstream 5.0kb downstream 9040 true chr1: 34943166-34952205 Medicago truncatula
Medtr1g078090 5.0kb downstream 5.0kb downstream 5000 false chr1: 34947206-34952205 Medicago truncatula
Medtr1g078090 10.0kb upstream 10.0kb upstream 14040 true chr1: 34933166-34947205 Medicago truncatula
Medtr1g078090 10.0kb upstream 10.0kb upstream 10000 false chr1: 34933166-34943165 Medicago truncatula
Medtr1g078090 10.0kb downstream 10.0kb downstream 14040 true chr1: 34943166-34957205 Medicago truncatula
Medtr1g078090 10.0kb downstream 10.0kb downstream 10000 false chr1: 34947206-34957205 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302216 5265 Fabidae View MSA
124062177 5270 Rosid View MSA
123743604 5271 Pentapetalae View MSA
122788291 5272 Eudicot View MSA
122046308 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47       Low
cufflinks 2.589        
cufflinks 3.187        
cufflinks 2.733        
cufflinks 4.702        
cufflinks 2.981        
cufflinks 4.396        
cufflinks 2.117        
cufflinks 3.081        

0 Strain