Gene : Medtr1g069235 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Description:  photosystem I reaction center subunit IV A
Genomic Order:  3595 Name:  ? Medtr1g069235
Secondary Identifier:  ? PAC:31093084
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g069235 0.5kb upstream 0.5kb upstream 2681 true chr1: 29816386-29819066 Medicago truncatula
Medtr1g069235 0.5kb upstream 0.5kb upstream 500 false chr1: 29816386-29816885 Medicago truncatula
Medtr1g069235 0.5kb downstream 0.5kb downstream 2681 true chr1: 29816886-29819566 Medicago truncatula
Medtr1g069235 0.5kb downstream 0.5kb downstream 500 false chr1: 29819067-29819566 Medicago truncatula
Medtr1g069235 1.0kb upstream 1.0kb upstream 3181 true chr1: 29815886-29819066 Medicago truncatula
Medtr1g069235 1.0kb upstream 1.0kb upstream 1000 false chr1: 29815886-29816885 Medicago truncatula
Medtr1g069235 1.0kb downstream 1.0kb downstream 3181 true chr1: 29816886-29820066 Medicago truncatula
Medtr1g069235 1.0kb downstream 1.0kb downstream 1000 false chr1: 29819067-29820066 Medicago truncatula
Medtr1g069235 2.0kb upstream 2.0kb upstream 4181 true chr1: 29814886-29819066 Medicago truncatula
Medtr1g069235 2.0kb upstream 2.0kb upstream 2000 false chr1: 29814886-29816885 Medicago truncatula
Medtr1g069235 2.0kb downstream 2.0kb downstream 4181 true chr1: 29816886-29821066 Medicago truncatula
Medtr1g069235 2.0kb downstream 2.0kb downstream 2000 false chr1: 29819067-29821066 Medicago truncatula
Medtr1g069235 5.0kb upstream 5.0kb upstream 7181 true chr1: 29811886-29819066 Medicago truncatula
Medtr1g069235 5.0kb upstream 5.0kb upstream 5000 false chr1: 29811886-29816885 Medicago truncatula
Medtr1g069235 5.0kb downstream 5.0kb downstream 7181 true chr1: 29816886-29824066 Medicago truncatula
Medtr1g069235 5.0kb downstream 5.0kb downstream 5000 false chr1: 29819067-29824066 Medicago truncatula
Medtr1g069235 10.0kb upstream 10.0kb upstream 12181 true chr1: 29806886-29819066 Medicago truncatula
Medtr1g069235 10.0kb upstream 10.0kb upstream 10000 false chr1: 29806886-29816885 Medicago truncatula
Medtr1g069235 10.0kb downstream 10.0kb downstream 12181 true chr1: 29816886-29829066 Medicago truncatula
Medtr1g069235 10.0kb downstream 10.0kb downstream 10000 false chr1: 29819067-29829066 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304273 5265 Fabidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.066       Low
cufflinks 365.048     High High
cufflinks 280.82     High  
cufflinks 0.469        
cufflinks 361.95     High High
cufflinks 0.455        
cufflinks 0.098       Low
cufflinks 303.562     High High
cufflinks 0.516        

0 Strain