Gene : Medtr1g078300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10589//PTHR10589:SF30 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Description:  ubiquitin carboxyl-terminal hydrolase family protein
Genomic Order:  4269 Name:  ? Medtr1g078300
Secondary Identifier:  ? PAC:31098567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g078300 0.5kb upstream 0.5kb upstream 4947 true chr1: 35057251-35062197 Medicago truncatula
Medtr1g078300 0.5kb upstream 0.5kb upstream 500 false chr1: 35057251-35057750 Medicago truncatula
Medtr1g078300 0.5kb downstream 0.5kb downstream 4947 true chr1: 35057751-35062697 Medicago truncatula
Medtr1g078300 0.5kb downstream 0.5kb downstream 500 false chr1: 35062198-35062697 Medicago truncatula
Medtr1g078300 1.0kb upstream 1.0kb upstream 5447 true chr1: 35056751-35062197 Medicago truncatula
Medtr1g078300 1.0kb upstream 1.0kb upstream 1000 false chr1: 35056751-35057750 Medicago truncatula
Medtr1g078300 1.0kb downstream 1.0kb downstream 5447 true chr1: 35057751-35063197 Medicago truncatula
Medtr1g078300 1.0kb downstream 1.0kb downstream 1000 false chr1: 35062198-35063197 Medicago truncatula
Medtr1g078300 2.0kb upstream 2.0kb upstream 6447 true chr1: 35055751-35062197 Medicago truncatula
Medtr1g078300 2.0kb upstream 2.0kb upstream 2000 false chr1: 35055751-35057750 Medicago truncatula
Medtr1g078300 2.0kb downstream 2.0kb downstream 6447 true chr1: 35057751-35064197 Medicago truncatula
Medtr1g078300 2.0kb downstream 2.0kb downstream 2000 false chr1: 35062198-35064197 Medicago truncatula
Medtr1g078300 5.0kb upstream 5.0kb upstream 9447 true chr1: 35052751-35062197 Medicago truncatula
Medtr1g078300 5.0kb upstream 5.0kb upstream 5000 false chr1: 35052751-35057750 Medicago truncatula
Medtr1g078300 5.0kb downstream 5.0kb downstream 9447 true chr1: 35057751-35067197 Medicago truncatula
Medtr1g078300 5.0kb downstream 5.0kb downstream 5000 false chr1: 35062198-35067197 Medicago truncatula
Medtr1g078300 10.0kb upstream 10.0kb upstream 14447 true chr1: 35047751-35062197 Medicago truncatula
Medtr1g078300 10.0kb upstream 10.0kb upstream 10000 false chr1: 35047751-35057750 Medicago truncatula
Medtr1g078300 10.0kb downstream 10.0kb downstream 14447 true chr1: 35057751-35072197 Medicago truncatula
Medtr1g078300 10.0kb downstream 10.0kb downstream 10000 false chr1: 35062198-35072197 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305215 5265 Fabidae View MSA
124068259 5270 Rosid View MSA
123738653 5271 Pentapetalae View MSA
122786762 5272 Eudicot View MSA
122047497 5273 Angiosperm View MSA
121350300 5274 Embryophyte View MSA
123424005 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.148        
cufflinks 2.722        
cufflinks 3.084        
cufflinks 1.226       Low
cufflinks 3.839       High
cufflinks 0.998       Low
cufflinks 1.73        
cufflinks 2.649        
cufflinks 1.911        

0 Strain