Gene : Medtr1g079790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00072//PF01590 - Response regulator receiver domain (Response_reg) // GAF domain (GAF) Description:  ethylene receptor ETR2
Genomic Order:  4337 Name:  ? Medtr1g079790
Secondary Identifier:  ? PAC:31093875
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079790 0.5kb upstream 0.5kb upstream 4918 true chr1: 35449244-35454161 Medicago truncatula
Medtr1g079790 0.5kb upstream 0.5kb upstream 500 false chr1: 35449244-35449743 Medicago truncatula
Medtr1g079790 0.5kb downstream 0.5kb downstream 4918 true chr1: 35449744-35454661 Medicago truncatula
Medtr1g079790 0.5kb downstream 0.5kb downstream 500 false chr1: 35454162-35454661 Medicago truncatula
Medtr1g079790 1.0kb upstream 1.0kb upstream 5418 true chr1: 35448744-35454161 Medicago truncatula
Medtr1g079790 1.0kb upstream 1.0kb upstream 1000 false chr1: 35448744-35449743 Medicago truncatula
Medtr1g079790 1.0kb downstream 1.0kb downstream 5418 true chr1: 35449744-35455161 Medicago truncatula
Medtr1g079790 1.0kb downstream 1.0kb downstream 1000 false chr1: 35454162-35455161 Medicago truncatula
Medtr1g079790 2.0kb upstream 2.0kb upstream 6418 true chr1: 35447744-35454161 Medicago truncatula
Medtr1g079790 2.0kb upstream 2.0kb upstream 2000 false chr1: 35447744-35449743 Medicago truncatula
Medtr1g079790 2.0kb downstream 2.0kb downstream 6418 true chr1: 35449744-35456161 Medicago truncatula
Medtr1g079790 2.0kb downstream 2.0kb downstream 2000 false chr1: 35454162-35456161 Medicago truncatula
Medtr1g079790 5.0kb upstream 5.0kb upstream 9418 true chr1: 35444744-35454161 Medicago truncatula
Medtr1g079790 5.0kb upstream 5.0kb upstream 5000 false chr1: 35444744-35449743 Medicago truncatula
Medtr1g079790 5.0kb downstream 5.0kb downstream 9418 true chr1: 35449744-35459161 Medicago truncatula
Medtr1g079790 5.0kb downstream 5.0kb downstream 5000 false chr1: 35454162-35459161 Medicago truncatula
Medtr1g079790 10.0kb upstream 10.0kb upstream 14418 true chr1: 35439744-35454161 Medicago truncatula
Medtr1g079790 10.0kb upstream 10.0kb upstream 10000 false chr1: 35439744-35449743 Medicago truncatula
Medtr1g079790 10.0kb downstream 10.0kb downstream 14418 true chr1: 35449744-35464161 Medicago truncatula
Medtr1g079790 10.0kb downstream 10.0kb downstream 10000 false chr1: 35454162-35464161 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314628 5265 Fabidae View MSA
124065160 5270 Rosid View MSA
123741292 5271 Pentapetalae View MSA
122795503 5272 Eudicot View MSA
122044609 5273 Angiosperm View MSA
121310320 5274 Embryophyte View MSA
123347836 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.08     High High
cufflinks 3.408        
cufflinks 6.244        
cufflinks 2.022       Low
cufflinks 3.993        
cufflinks 2.707        
cufflinks 4.259        
cufflinks 4.558        
cufflinks 2.683        

0 Strain