Gene : Medtr1g079730 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Description:  carboxyl-terminal peptidase
Genomic Order:  4330 Name:  ? Medtr1g079730
Secondary Identifier:  ? PAC:31099661
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079730 0.5kb upstream 0.5kb upstream 5015 true chr1: 35405187-35410201 Medicago truncatula
Medtr1g079730 0.5kb upstream 0.5kb upstream 500 false chr1: 35405187-35405686 Medicago truncatula
Medtr1g079730 0.5kb downstream 0.5kb downstream 5015 true chr1: 35405687-35410701 Medicago truncatula
Medtr1g079730 0.5kb downstream 0.5kb downstream 500 false chr1: 35410202-35410701 Medicago truncatula
Medtr1g079730 1.0kb upstream 1.0kb upstream 5515 true chr1: 35404687-35410201 Medicago truncatula
Medtr1g079730 1.0kb upstream 1.0kb upstream 1000 false chr1: 35404687-35405686 Medicago truncatula
Medtr1g079730 1.0kb downstream 1.0kb downstream 5515 true chr1: 35405687-35411201 Medicago truncatula
Medtr1g079730 1.0kb downstream 1.0kb downstream 1000 false chr1: 35410202-35411201 Medicago truncatula
Medtr1g079730 2.0kb upstream 2.0kb upstream 6515 true chr1: 35403687-35410201 Medicago truncatula
Medtr1g079730 2.0kb upstream 2.0kb upstream 2000 false chr1: 35403687-35405686 Medicago truncatula
Medtr1g079730 2.0kb downstream 2.0kb downstream 6515 true chr1: 35405687-35412201 Medicago truncatula
Medtr1g079730 2.0kb downstream 2.0kb downstream 2000 false chr1: 35410202-35412201 Medicago truncatula
Medtr1g079730 5.0kb upstream 5.0kb upstream 9515 true chr1: 35400687-35410201 Medicago truncatula
Medtr1g079730 5.0kb upstream 5.0kb upstream 5000 false chr1: 35400687-35405686 Medicago truncatula
Medtr1g079730 5.0kb downstream 5.0kb downstream 9515 true chr1: 35405687-35415201 Medicago truncatula
Medtr1g079730 5.0kb downstream 5.0kb downstream 5000 false chr1: 35410202-35415201 Medicago truncatula
Medtr1g079730 10.0kb upstream 10.0kb upstream 14515 true chr1: 35395687-35410201 Medicago truncatula
Medtr1g079730 10.0kb upstream 10.0kb upstream 10000 false chr1: 35395687-35405686 Medicago truncatula
Medtr1g079730 10.0kb downstream 10.0kb downstream 14515 true chr1: 35405687-35420201 Medicago truncatula
Medtr1g079730 10.0kb downstream 10.0kb downstream 10000 false chr1: 35410202-35420201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304350 5265 Fabidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.072     High High
cufflinks 0.202        
cufflinks 0.158        
cufflinks 0.124        
cufflinks 0.252        
cufflinks 0.246        
cufflinks 0.282        
cufflinks 0.176        
cufflinks 0.536        

0 Strain