Gene : Medtr1g079760 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11730:SF39 - AMMONIUM TRANSPORTER 1 MEMBER 2 Description:  ammonium transporter 1 protein
Genomic Order:  4332 Name:  ? Medtr1g079760
Secondary Identifier:  ? PAC:31097307
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079760 0.5kb upstream 0.5kb upstream 2550 true chr1: 35414651-35417200 Medicago truncatula
Medtr1g079760 0.5kb upstream 0.5kb upstream 500 false chr1: 35416701-35417200 Medicago truncatula
Medtr1g079760 0.5kb downstream 0.5kb downstream 2550 true chr1: 35414151-35416700 Medicago truncatula
Medtr1g079760 0.5kb downstream 0.5kb downstream 500 false chr1: 35414151-35414650 Medicago truncatula
Medtr1g079760 1.0kb upstream 1.0kb upstream 3050 true chr1: 35414651-35417700 Medicago truncatula
Medtr1g079760 1.0kb upstream 1.0kb upstream 1000 false chr1: 35416701-35417700 Medicago truncatula
Medtr1g079760 1.0kb downstream 1.0kb downstream 3050 true chr1: 35413651-35416700 Medicago truncatula
Medtr1g079760 1.0kb downstream 1.0kb downstream 1000 false chr1: 35413651-35414650 Medicago truncatula
Medtr1g079760 2.0kb upstream 2.0kb upstream 4050 true chr1: 35414651-35418700 Medicago truncatula
Medtr1g079760 2.0kb upstream 2.0kb upstream 2000 false chr1: 35416701-35418700 Medicago truncatula
Medtr1g079760 2.0kb downstream 2.0kb downstream 4050 true chr1: 35412651-35416700 Medicago truncatula
Medtr1g079760 2.0kb downstream 2.0kb downstream 2000 false chr1: 35412651-35414650 Medicago truncatula
Medtr1g079760 5.0kb upstream 5.0kb upstream 7050 true chr1: 35414651-35421700 Medicago truncatula
Medtr1g079760 5.0kb upstream 5.0kb upstream 5000 false chr1: 35416701-35421700 Medicago truncatula
Medtr1g079760 5.0kb downstream 5.0kb downstream 7050 true chr1: 35409651-35416700 Medicago truncatula
Medtr1g079760 5.0kb downstream 5.0kb downstream 5000 false chr1: 35409651-35414650 Medicago truncatula
Medtr1g079760 10.0kb upstream 10.0kb upstream 12050 true chr1: 35414651-35426700 Medicago truncatula
Medtr1g079760 10.0kb upstream 10.0kb upstream 10000 false chr1: 35416701-35426700 Medicago truncatula
Medtr1g079760 10.0kb downstream 10.0kb downstream 12050 true chr1: 35404651-35416700 Medicago truncatula
Medtr1g079760 10.0kb downstream 10.0kb downstream 10000 false chr1: 35404651-35414650 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306277 5265 Fabidae View MSA
124067931 5270 Rosid View MSA
123740336 5271 Pentapetalae View MSA
122796645 5272 Eudicot View MSA
122042799 5273 Angiosperm View MSA
121344623 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.208        
cufflinks 7.03       High
cufflinks 0.766        
cufflinks 0.117       Low
cufflinks 3.112       High
cufflinks 0.794        
cufflinks 0.331        
cufflinks 1.958        
cufflinks 0.282        

0 Strain