Gene : Medtr1g079490 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Description:  germin family protein
Genomic Order:  4317 Name:  ? Medtr1g079490
Secondary Identifier:  ? PAC:31100545
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079490 0.5kb upstream 0.5kb upstream 1809 true chr1: 35312392-35314200 Medicago truncatula
Medtr1g079490 0.5kb upstream 0.5kb upstream 500 false chr1: 35312392-35312891 Medicago truncatula
Medtr1g079490 0.5kb downstream 0.5kb downstream 1809 true chr1: 35312892-35314700 Medicago truncatula
Medtr1g079490 0.5kb downstream 0.5kb downstream 500 false chr1: 35314201-35314700 Medicago truncatula
Medtr1g079490 1.0kb upstream 1.0kb upstream 2309 true chr1: 35311892-35314200 Medicago truncatula
Medtr1g079490 1.0kb upstream 1.0kb upstream 1000 false chr1: 35311892-35312891 Medicago truncatula
Medtr1g079490 1.0kb downstream 1.0kb downstream 2309 true chr1: 35312892-35315200 Medicago truncatula
Medtr1g079490 1.0kb downstream 1.0kb downstream 1000 false chr1: 35314201-35315200 Medicago truncatula
Medtr1g079490 2.0kb upstream 2.0kb upstream 3309 true chr1: 35310892-35314200 Medicago truncatula
Medtr1g079490 2.0kb upstream 2.0kb upstream 2000 false chr1: 35310892-35312891 Medicago truncatula
Medtr1g079490 2.0kb downstream 2.0kb downstream 3309 true chr1: 35312892-35316200 Medicago truncatula
Medtr1g079490 2.0kb downstream 2.0kb downstream 2000 false chr1: 35314201-35316200 Medicago truncatula
Medtr1g079490 5.0kb upstream 5.0kb upstream 6309 true chr1: 35307892-35314200 Medicago truncatula
Medtr1g079490 5.0kb upstream 5.0kb upstream 5000 false chr1: 35307892-35312891 Medicago truncatula
Medtr1g079490 5.0kb downstream 5.0kb downstream 6309 true chr1: 35312892-35319200 Medicago truncatula
Medtr1g079490 5.0kb downstream 5.0kb downstream 5000 false chr1: 35314201-35319200 Medicago truncatula
Medtr1g079490 10.0kb upstream 10.0kb upstream 11309 true chr1: 35302892-35314200 Medicago truncatula
Medtr1g079490 10.0kb upstream 10.0kb upstream 10000 false chr1: 35302892-35312891 Medicago truncatula
Medtr1g079490 10.0kb downstream 10.0kb downstream 11309 true chr1: 35312892-35324200 Medicago truncatula
Medtr1g079490 10.0kb downstream 10.0kb downstream 10000 false chr1: 35314201-35324200 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.888     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 355.849     High  
cufflinks 0.062     Low Low
cufflinks 221.376     High  
cufflinks 503.111     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 320.506     High  

0 Strain