Gene : Medtr1g080250 M. truncatula Mt4.0v1
Defline:  (1 of 2) 4.1.2.5 - L-threonine aldolase / L-threonine acetaldehyde-lyase Description:  L-allo-threonine aldolase-like protein
Genomic Order:  4363 Name:  ? Medtr1g080250
Secondary Identifier:  ? PAC:31099819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080250 0.5kb upstream 0.5kb upstream 9303 true chr1: 35626802-35636104 Medicago truncatula
Medtr1g080250 0.5kb upstream 0.5kb upstream 500 false chr1: 35635605-35636104 Medicago truncatula
Medtr1g080250 0.5kb downstream 0.5kb downstream 9303 true chr1: 35626302-35635604 Medicago truncatula
Medtr1g080250 0.5kb downstream 0.5kb downstream 500 false chr1: 35626302-35626801 Medicago truncatula
Medtr1g080250 1.0kb upstream 1.0kb upstream 9803 true chr1: 35626802-35636604 Medicago truncatula
Medtr1g080250 1.0kb upstream 1.0kb upstream 1000 false chr1: 35635605-35636604 Medicago truncatula
Medtr1g080250 1.0kb downstream 1.0kb downstream 9803 true chr1: 35625802-35635604 Medicago truncatula
Medtr1g080250 1.0kb downstream 1.0kb downstream 1000 false chr1: 35625802-35626801 Medicago truncatula
Medtr1g080250 2.0kb upstream 2.0kb upstream 10803 true chr1: 35626802-35637604 Medicago truncatula
Medtr1g080250 2.0kb upstream 2.0kb upstream 2000 false chr1: 35635605-35637604 Medicago truncatula
Medtr1g080250 2.0kb downstream 2.0kb downstream 10803 true chr1: 35624802-35635604 Medicago truncatula
Medtr1g080250 2.0kb downstream 2.0kb downstream 2000 false chr1: 35624802-35626801 Medicago truncatula
Medtr1g080250 5.0kb upstream 5.0kb upstream 13803 true chr1: 35626802-35640604 Medicago truncatula
Medtr1g080250 5.0kb upstream 5.0kb upstream 5000 false chr1: 35635605-35640604 Medicago truncatula
Medtr1g080250 5.0kb downstream 5.0kb downstream 13803 true chr1: 35621802-35635604 Medicago truncatula
Medtr1g080250 5.0kb downstream 5.0kb downstream 5000 false chr1: 35621802-35626801 Medicago truncatula
Medtr1g080250 10.0kb upstream 10.0kb upstream 18803 true chr1: 35626802-35645604 Medicago truncatula
Medtr1g080250 10.0kb upstream 10.0kb upstream 10000 false chr1: 35635605-35645604 Medicago truncatula
Medtr1g080250 10.0kb downstream 10.0kb downstream 18803 true chr1: 35616802-35635604 Medicago truncatula
Medtr1g080250 10.0kb downstream 10.0kb downstream 10000 false chr1: 35616802-35626801 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297215 5265 Fabidae View MSA
124072258 5270 Rosid View MSA
123752344 5271 Pentapetalae View MSA
122796075 5272 Eudicot View MSA
122044905 5273 Angiosperm View MSA
121345445 5274 Embryophyte View MSA
123424169 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.757     High  
cufflinks 10.234     High  
cufflinks 31.736     High High
cufflinks 1.97        
cufflinks 8.497        
cufflinks 5.608        
cufflinks 3.433        
cufflinks 22.403     High High
cufflinks 0.709       Low

0 Strain