Gene : Medtr1g105930 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.7.1.134 - Inositol-tetrakisphosphate 1-kinase / Inositol-trisphosphate 6-kinase Description:  inositol 1,3,4-trisphosphate 5/6-kinase
Genomic Order:  6001 Name:  ? Medtr1g105930
Secondary Identifier:  ? PAC:31097726
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6365 Medicago truncatula pathologic  
Mtruncatula PWY-6366 Medicago truncatula pathologic  
Mtruncatula PWY-6554 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g105930 0.5kb upstream 0.5kb upstream 5807 true chr1: 47846313-47852119 Medicago truncatula
Medtr1g105930 0.5kb upstream 0.5kb upstream 500 false chr1: 47851620-47852119 Medicago truncatula
Medtr1g105930 0.5kb downstream 0.5kb downstream 5807 true chr1: 47845813-47851619 Medicago truncatula
Medtr1g105930 0.5kb downstream 0.5kb downstream 500 false chr1: 47845813-47846312 Medicago truncatula
Medtr1g105930 1.0kb upstream 1.0kb upstream 6307 true chr1: 47846313-47852619 Medicago truncatula
Medtr1g105930 1.0kb upstream 1.0kb upstream 1000 false chr1: 47851620-47852619 Medicago truncatula
Medtr1g105930 1.0kb downstream 1.0kb downstream 6307 true chr1: 47845313-47851619 Medicago truncatula
Medtr1g105930 1.0kb downstream 1.0kb downstream 1000 false chr1: 47845313-47846312 Medicago truncatula
Medtr1g105930 2.0kb upstream 2.0kb upstream 7307 true chr1: 47846313-47853619 Medicago truncatula
Medtr1g105930 2.0kb upstream 2.0kb upstream 2000 false chr1: 47851620-47853619 Medicago truncatula
Medtr1g105930 2.0kb downstream 2.0kb downstream 7307 true chr1: 47844313-47851619 Medicago truncatula
Medtr1g105930 2.0kb downstream 2.0kb downstream 2000 false chr1: 47844313-47846312 Medicago truncatula
Medtr1g105930 5.0kb upstream 5.0kb upstream 10307 true chr1: 47846313-47856619 Medicago truncatula
Medtr1g105930 5.0kb upstream 5.0kb upstream 5000 false chr1: 47851620-47856619 Medicago truncatula
Medtr1g105930 5.0kb downstream 5.0kb downstream 10307 true chr1: 47841313-47851619 Medicago truncatula
Medtr1g105930 5.0kb downstream 5.0kb downstream 5000 false chr1: 47841313-47846312 Medicago truncatula
Medtr1g105930 10.0kb upstream 10.0kb upstream 15307 true chr1: 47846313-47861619 Medicago truncatula
Medtr1g105930 10.0kb upstream 10.0kb upstream 10000 false chr1: 47851620-47861619 Medicago truncatula
Medtr1g105930 10.0kb downstream 10.0kb downstream 15307 true chr1: 47836313-47851619 Medicago truncatula
Medtr1g105930 10.0kb downstream 10.0kb downstream 10000 false chr1: 47836313-47846312 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041123 5273 Angiosperm View MSA
122299034 5265 Fabidae View MSA
124060852 5270 Rosid View MSA
123745462 5271 Pentapetalae View MSA
122790071 5272 Eudicot View MSA
121347833 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.632       High
cufflinks 1.265        
cufflinks 1.609        
cufflinks 0.212       Low
cufflinks 1.991        
cufflinks 0.06     Low Low
cufflinks 0.76        
cufflinks 1.354        
cufflinks 0.567        

0 Strain