Gene : Medtr1g106735 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Description:  DUF566 family protein
Genomic Order:  6065 Name:  ? Medtr1g106735
Secondary Identifier:  ? PAC:31097455
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106735 0.5kb upstream 0.5kb upstream 7487 true chr1: 48281202-48288688 Medicago truncatula
Medtr1g106735 0.5kb upstream 0.5kb upstream 500 false chr1: 48288189-48288688 Medicago truncatula
Medtr1g106735 0.5kb downstream 0.5kb downstream 7487 true chr1: 48280702-48288188 Medicago truncatula
Medtr1g106735 0.5kb downstream 0.5kb downstream 500 false chr1: 48280702-48281201 Medicago truncatula
Medtr1g106735 1.0kb upstream 1.0kb upstream 7987 true chr1: 48281202-48289188 Medicago truncatula
Medtr1g106735 1.0kb upstream 1.0kb upstream 1000 false chr1: 48288189-48289188 Medicago truncatula
Medtr1g106735 1.0kb downstream 1.0kb downstream 7987 true chr1: 48280202-48288188 Medicago truncatula
Medtr1g106735 1.0kb downstream 1.0kb downstream 1000 false chr1: 48280202-48281201 Medicago truncatula
Medtr1g106735 2.0kb upstream 2.0kb upstream 8987 true chr1: 48281202-48290188 Medicago truncatula
Medtr1g106735 2.0kb upstream 2.0kb upstream 2000 false chr1: 48288189-48290188 Medicago truncatula
Medtr1g106735 2.0kb downstream 2.0kb downstream 8987 true chr1: 48279202-48288188 Medicago truncatula
Medtr1g106735 2.0kb downstream 2.0kb downstream 2000 false chr1: 48279202-48281201 Medicago truncatula
Medtr1g106735 5.0kb upstream 5.0kb upstream 11987 true chr1: 48281202-48293188 Medicago truncatula
Medtr1g106735 5.0kb upstream 5.0kb upstream 5000 false chr1: 48288189-48293188 Medicago truncatula
Medtr1g106735 5.0kb downstream 5.0kb downstream 11987 true chr1: 48276202-48288188 Medicago truncatula
Medtr1g106735 5.0kb downstream 5.0kb downstream 5000 false chr1: 48276202-48281201 Medicago truncatula
Medtr1g106735 10.0kb upstream 10.0kb upstream 16987 true chr1: 48281202-48298188 Medicago truncatula
Medtr1g106735 10.0kb upstream 10.0kb upstream 10000 false chr1: 48288189-48298188 Medicago truncatula
Medtr1g106735 10.0kb downstream 10.0kb downstream 16987 true chr1: 48271202-48288188 Medicago truncatula
Medtr1g106735 10.0kb downstream 10.0kb downstream 10000 false chr1: 48271202-48281201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300701 5265 Fabidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.977       High
cufflinks 1.41        
cufflinks 1.447        
cufflinks 0.627        
cufflinks 1.572        
cufflinks 0.235       Low
cufflinks 0.82        
cufflinks 1.308        
cufflinks 1.043        

0 Strain